PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
ocimum_basilicum_1032.g39.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1083.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1083.g4.t1 Alkaloid T3O low borderline
ocimum_basilicum_1083.g5.t1 Alkaloid T3O low borderline
ocimum_basilicum_1168.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1168.g5.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1179.g15.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1209.g9.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1248.g17.t1 Alkaloid T3O medium pass
ocimum_basilicum_1276.g37.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1344.g10.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1344.g11.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1356.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1356.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1370.g9.t1 Alkaloid T3O low borderline
ocimum_basilicum_1385.g14.t1 Alkaloid T3O medium pass
ocimum_basilicum_1521.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1521.g12.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1521.g17.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1521.g20.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1568.g34.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1568.g35.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1583.g16.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1583.g33.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1583.g82.t1 Alkaloid T3O medium pass
ocimum_basilicum_1593.g22.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1593.g23.t1 Alkaloid T3O medium pass
ocimum_basilicum_1627.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1640.g2.t1 Alkaloid T3O medium pass
ocimum_basilicum_1681.g19.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1701.g142.t1 Alkaloid T3O medium pass
ocimum_basilicum_1701.g164.t1 Alkaloid T3O medium pass
ocimum_basilicum_1717.g6.t1 Alkaloid T3O low borderline
ocimum_basilicum_1721.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1721.g6.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1721.g7.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1721.g8.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1735.g25.t1 Alkaloid T3O low borderline
ocimum_basilicum_1737.g16.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1807.g1.t1 Alkaloid T3O low borderline
ocimum_basilicum_1842.g18.t1 Alkaloid T3O medium pass
ocimum_basilicum_1842.g64.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1846.g49.t1 Alkaloid T3O medium pass
ocimum_basilicum_1870.g30.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1874.g13.t1 Alkaloid T3O medium pass
ocimum_basilicum_1874.g18.t1 Alkaloid T3O medium pass
ocimum_basilicum_1874.g23.t1 Alkaloid T3O medium pass
ocimum_basilicum_1874.g25.t1 Alkaloid T3O medium pass
ocimum_basilicum_1908.g32.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1940.g12.t1 Alkaloid T3O medium borderline