PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
ocimum_basilicum_347838.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_348218.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_348218.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_348218.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_348920.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_350607.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_351064.g1.t1 Alkaloid T3O medium pass
ocimum_basilicum_353691.g1.t1 Alkaloid T3O medium pass
ocimum_basilicum_354132.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_359291.g1.t1 Alkaloid T3O medium pass
ocimum_basilicum_359536.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_360142.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_363376.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_363632.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_364613.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_364722.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_366495.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_366918.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_366964.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_368858.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_371177.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_372329.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_372346.g3.t1 Alkaloid T3O medium pass
ocimum_basilicum_372726.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_372726.g4.t1 Alkaloid T3O medium borderline
ocimum_basilicum_372726.g5.t1 Alkaloid T3O medium borderline
ocimum_basilicum_373071.g1.t1 Alkaloid T3O medium pass
ocimum_basilicum_373295.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_373295.g8.t1 Alkaloid T3O medium borderline
ocimum_basilicum_373347.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_373347.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_374289.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_374603.g1.t1 Alkaloid T3O medium pass
ocimum_basilicum_375145.g6.t1 Alkaloid T3O medium pass
ocimum_basilicum_375145.g8.t1 Alkaloid T3O medium pass
ocimum_basilicum_375154.g9.t1 Alkaloid T3O medium borderline
ocimum_basilicum_375363.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_375493.g7.t1 Alkaloid T3O medium borderline
ocimum_basilicum_375493.g8.t1 Alkaloid T3O medium borderline
ocimum_basilicum_375563.g2.t1 Alkaloid T3O medium pass
ocimum_basilicum_376.g61.t1 Alkaloid T3O medium borderline
ocimum_basilicum_376328.g5.t1 Alkaloid T3O medium borderline
ocimum_basilicum_376328.g7.t1 Alkaloid T3O medium borderline
ocimum_basilicum_376448.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_376503.g6.t1 Alkaloid T3O medium borderline
ocimum_basilicum_376636.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_376710.g18.t1 Alkaloid T3O medium borderline
ocimum_basilicum_376710.g26.t1 Alkaloid T3O medium borderline
ocimum_basilicum_377399.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_377587.g21.t1 Alkaloid T3O medium borderline