PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_377710.g1.t1 Alkaloid T3O low borderline
ocimum_basilicum_377816.g9.t1 Alkaloid T3O medium pass
ocimum_basilicum_377880.g6.t1 Alkaloid T3O medium borderline
ocimum_basilicum_378015.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_378015.g6.t1 Alkaloid T3O medium borderline
ocimum_basilicum_378146.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_378483.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_378949.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_378949.g19.t1 Alkaloid T3O medium borderline
ocimum_basilicum_378949.g28.t1 Alkaloid T3O medium borderline
ocimum_basilicum_379018.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_379193.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_379501.g10.t1 Alkaloid T3O medium borderline
ocimum_basilicum_379726.g4.t1 Alkaloid T3O medium borderline
ocimum_basilicum_379820.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_379861.g4.t1 Alkaloid T3O medium pass
ocimum_basilicum_379980.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380191.g32.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380390.g2.t1 Alkaloid T3O low borderline
ocimum_basilicum_380515.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380515.g9.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380540.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380588.g2.t1 Alkaloid T3O medium pass
ocimum_basilicum_380829.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380877.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380913.g5.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380927.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_380995.g3.t1 Alkaloid T3O low borderline
ocimum_basilicum_381103.g13.t1 Alkaloid T3O medium pass
ocimum_basilicum_381120.g15.t1 Alkaloid T3O medium pass
ocimum_basilicum_381158.g5.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381158.g6.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381218.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381255.g1.t1 Alkaloid T3O medium pass
ocimum_basilicum_381334.g7.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381334.g8.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381334.g9.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g13.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g14.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g23.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g24.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g25.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g27.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g28.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381419.g34.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381712.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381732.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381737.g12.t1 Alkaloid T3O medium borderline
ocimum_basilicum_381845.g18.t1 Alkaloid T3O medium pass
ocimum_basilicum_381885.g9.t1 Alkaloid T3O medium borderline