PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status
ocimum_basilicum_378681.g4.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_378949.g15.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_378949.g3.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_378949.g8.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_379540.g15.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_379894.g1.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_380001.g1.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_380515.g11.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_380860.g1.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_380878.g9.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_381128.g1.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_382057.g24.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_382145.g28.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_382181.g79.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_382181.g81.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_382824.g2.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_382860.g34.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_383013.g40.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_383013.g52.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_383013.g53.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_383013.g54.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_383415.g119.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_383415.g120.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384500.g77.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384596.g101.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_384596.g106.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_384596.g107.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_384596.g111.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_384596.g97.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384808.g10.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384808.g12.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384808.g13.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_384808.g15.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384808.g36.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_384808.g37.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_384808.g38.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384808.g8.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384868.g28.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_384929.g42.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_385066.g12.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_385066.g20.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_385066.g37.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_385066.g9.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_385272.g22.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_385474.g14.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_385485.g53.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_386072.g92.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_386152.g7.t1 Rosmarinic Acid TAT low borderline
ocimum_basilicum_386163.g32.t1 Rosmarinic Acid TAT medium pass
ocimum_basilicum_386561.g1.t1 Rosmarinic Acid TAT medium pass