PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1593.g71.t1 Terpenoid TPS medium pass TPS__00126__sp_J7LH11_TPS8_PHYDL
ocimum_basilicum_1601.g49.t1 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_1800.g10.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_1800.g2.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_1800.g7.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_1824.g34.t1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ocimum_basilicum_1841.g2.t1 Terpenoid TPS medium pass TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA
ocimum_basilicum_1852.g18.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1852.g19.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1852.g20.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1852.g21.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1852.g23.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1852.g31.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_1864.g3.t1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ocimum_basilicum_1873.g23.t1 Terpenoid TPS medium pass TPS__00067__sp_C0KWV7_LNOL4_PERFR
ocimum_basilicum_1873.g25.t1 Terpenoid TPS medium pass TPS__00063__sp_C0KWV3_LNOLS_PERFH
ocimum_basilicum_1873.g27.t1 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
ocimum_basilicum_1896.g32.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_1897.g1.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_1897.g2.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_1897.g8.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_1913.g46.t1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
ocimum_basilicum_1940.g11.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_274741.g1.t1 Terpenoid TPS medium pass TPS__00078__sp_D5KXD2_TPS12_SOLLC
ocimum_basilicum_307925.g1.t1 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
ocimum_basilicum_313383.g1.t1 Terpenoid TPS low borderline TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
ocimum_basilicum_320941.g2.t1 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_336010.g2.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_344904.g5.t1 Terpenoid TPS medium pass TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
ocimum_basilicum_353238.g1.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_359230.g1.t1 Terpenoid TPS medium pass TPS__00128__sp_J7LMP2_TPS5_PHYDL
ocimum_basilicum_359230.g2.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_359243.g2.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_359243.g3.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_359395.g4.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_360000.g2.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_361556.g1.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_361556.g2.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_365251.g4.t1 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
ocimum_basilicum_367092.g4.t1 Terpenoid TPS medium pass TPS__00067__sp_C0KWV7_LNOL4_PERFR
ocimum_basilicum_369044.g1.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_369153.g2.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_370843.g2.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_371939.g1.t1 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_374179.g7.t1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ocimum_basilicum_374179.g8.t1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ocimum_basilicum_374962.g1.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_374962.g2.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_374962.g3.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_374962.g4.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU