PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_374962.g5.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_375386.g1.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_375386.g2.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_375386.g3.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_375386.g4.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_375653.g3.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_375653.g4.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_375653.g5.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_376710.g19.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_376710.g22.t1 Terpenoid TPS medium pass TPS__00034__sp_A0A2K9RFZ7_TPS1_VITAC
ocimum_basilicum_376710.g23.t1 Terpenoid TPS medium pass TPS__00034__sp_A0A2K9RFZ7_TPS1_VITAC
ocimum_basilicum_376710.g25.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_376710.g27.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_377093.g1.t1 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
ocimum_basilicum_377979.g13.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_377979.g14.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_377979.g6.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_377979.g7.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_378913.g8.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_379541.g1.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_379726.g6.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_380.g82.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_380032.g16.t1 Terpenoid TPS medium pass TPS__00031__sp_A0A1X9ISH5_KSL3_ISORU
ocimum_basilicum_380969.g5.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_380969.g8.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_381297.g6.t1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
ocimum_basilicum_381297.g7.t1 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
ocimum_basilicum_381460.g3.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_381746.g5.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_381804.g25.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_381982.g12.t1 Terpenoid TPS medium pass TPS__00083__sp_E2E2N4_BCPSF_ORIVU
ocimum_basilicum_382173.g18.t1 Terpenoid TPS low borderline TPS__00156__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_382173.g20.t1 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
ocimum_basilicum_382173.g7.t1 Terpenoid TPS medium pass TPS__00156__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_382343.g1.t1 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
ocimum_basilicum_382380.g38.t1 Terpenoid TPS medium pass TPS__00065__sp_C0KWV5_LNOL7_PERFR
ocimum_basilicum_382410.g1.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_382410.g2.t1 Terpenoid TPS medium pass TPS__00085__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_382496.g2.t1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
ocimum_basilicum_382720.g26.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_382720.g30.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_382720.g33.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_382836.g20.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_382836.g23.t1 Terpenoid TPS medium pass TPS__00035__sp_A0A2K9RFZ8_TPS3_VITAC
ocimum_basilicum_382836.g8.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_382836.g9.t1 Terpenoid TPS medium pass TPS__00028__sp_A0A1W6QDI7_KSL1_ISORU
ocimum_basilicum_382860.g14.t1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
ocimum_basilicum_383121.g24.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_383220.g17.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_383220.g18.t1 Terpenoid TPS low borderline TPS__00148__sp_O64961_TPS9_SOLLC