PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Protein/Isoform Record Pathway Family Confidence Status Best Target
ocimum_basilicum_564.g98.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_565.g55.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g57.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g59.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g61.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g62.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g63.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g66.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g67.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_565.g68.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_662.g43.t1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
ocimum_basilicum_691.g23.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_703.g65.t1 Terpenoid TPS low borderline TPS__00087__sp_E2E2P0_GTPS_ORIVU
ocimum_basilicum_704.g43.t1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
ocimum_basilicum_722.g135.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_722.g136.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_722.g137.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_722.g138.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_722.g139.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_722.g140.t1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
ocimum_basilicum_741.g120.t1 Terpenoid TPS low borderline TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
ocimum_basilicum_741.g121.t1 Terpenoid TPS medium pass TPS__00026__sp_A0A1V0QSH1_TS6FN_CANSA
ocimum_basilicum_741.g122.t1 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
ocimum_basilicum_741.g124.t1 Terpenoid TPS medium pass TPS__00130__sp_J7LQ09_TPS7_PHYDL
ocimum_basilicum_741.g125.t1 Terpenoid TPS medium pass TPS__00130__sp_J7LQ09_TPS7_PHYDL
ocimum_basilicum_797.g2.t1 Terpenoid TPS low borderline TPS__00148__sp_O64961_TPS9_SOLLC
ocimum_basilicum_844.g5.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_853.g22.t1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_853.g23.t1 Terpenoid TPS low borderline TPS__00114__sp_G5CV45_TPS32_SOLLC
ocimum_basilicum_923.g1.t1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
ocimum_basilicum_923.g5.t1 Terpenoid TPS medium pass TPS__00035__sp_A0A2K9RFZ8_TPS3_VITAC
ocimum_basilicum_973.g50.t1 Terpenoid TPS medium pass TPS__00064__sp_C0KWV4_GRNLG_PERFH