PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_547.g310.t1 Flavonoid UFGT medium pass
ocimum_basilicum_547.g329.t1 Flavonoid UFGT high pass
ocimum_basilicum_547711.g1.t1 Flavonoid UFGT high pass
ocimum_basilicum_547711.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_547712.g1.t1 Flavonoid UFGT high pass
ocimum_basilicum_547712.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_556.g212.t1 Flavonoid UFGT high pass
ocimum_basilicum_558.g200.t1 Flavonoid UFGT medium pass
ocimum_basilicum_558.g202.t1 Flavonoid UFGT medium pass
ocimum_basilicum_570170.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_570170.g4.t1 Flavonoid UFGT medium pass
ocimum_basilicum_570171.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_570171.g4.t1 Flavonoid UFGT medium pass
ocimum_basilicum_570227.g2.t1 Flavonoid UFGT low borderline
ocimum_basilicum_570228.g2.t1 Flavonoid UFGT low borderline
ocimum_basilicum_648.g61.t1 Flavonoid UFGT low borderline
ocimum_basilicum_653.g10.t1 Flavonoid UFGT medium pass
ocimum_basilicum_653.g11.t1 Flavonoid UFGT medium pass
ocimum_basilicum_653.g15.t1 Flavonoid UFGT medium pass
ocimum_basilicum_653.g8.t1 Flavonoid UFGT medium pass
ocimum_basilicum_656.g120.t1 Flavonoid UFGT medium pass
ocimum_basilicum_664.g17.t1 Flavonoid UFGT high pass
ocimum_basilicum_664.g18.t1 Flavonoid UFGT medium pass
ocimum_basilicum_664.g23.t1 Flavonoid UFGT medium pass
ocimum_basilicum_664.g27.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g22.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g24.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g26.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g28.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g29.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g30.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g31.t1 Flavonoid UFGT medium pass
ocimum_basilicum_665.g36.t1 Flavonoid UFGT medium pass
ocimum_basilicum_667.g34.t1 Flavonoid UFGT high pass
ocimum_basilicum_674.g49.t1 Flavonoid UFGT high pass
ocimum_basilicum_674.g5.t1 Flavonoid UFGT medium pass
ocimum_basilicum_677.g9.t1 Flavonoid UFGT high pass
ocimum_basilicum_678.g14.t1 Flavonoid UFGT high pass
ocimum_basilicum_678.g16.t1 Flavonoid UFGT medium pass
ocimum_basilicum_678.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_678.g5.t1 Flavonoid UFGT high pass
ocimum_basilicum_680.g116.t1 Flavonoid UFGT high pass
ocimum_basilicum_685.g18.t1 Flavonoid UFGT high pass
ocimum_basilicum_697.g37.t1 Flavonoid UFGT medium pass
ocimum_basilicum_697.g41.t1 Flavonoid UFGT high pass
ocimum_basilicum_697.g50.t1 Flavonoid UFGT medium pass
ocimum_basilicum_701.g102.t1 Flavonoid UFGT medium pass
ocimum_basilicum_701.g88.t1 Flavonoid UFGT medium pass
ocimum_basilicum_703.g10.t1 Flavonoid UFGT high pass
ocimum_basilicum_703.g11.t1 Flavonoid UFGT high pass