PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1869.g40.t1 Terpenoid UGT low borderline UGT__00031__sp_F8WKW0_UGT1_GARJA
ocimum_basilicum_1869.g41.t1 Terpenoid UGT medium pass UGT__00031__sp_F8WKW0_UGT1_GARJA
ocimum_basilicum_1869.g42.t1 Terpenoid UGT medium pass UGT__00072__sp_Q6VAB0_U85C2_STERE
ocimum_basilicum_1879.g121.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
ocimum_basilicum_1896.g20.t1 Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
ocimum_basilicum_1896.g23.t1 Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
ocimum_basilicum_1902.g17.t1 Terpenoid UGT medium pass UGT__00071__sp_Q6VAA6_U74G1_STERE
ocimum_basilicum_1906.g12.t1 Terpenoid UGT low borderline UGT__00085__sp_Q9FIA0_U76C2_ARATH
ocimum_basilicum_1925.g3.t1 Terpenoid UGT low borderline UGT__00045__sp_K4GKX2_73C10_BARVU
ocimum_basilicum_1949.g155.t1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
ocimum_basilicum_1953.g55.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
ocimum_basilicum_1953.g59.t1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
ocimum_basilicum_1953.g60.t1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
ocimum_basilicum_1953.g62.t1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
ocimum_basilicum_1953.g67.t1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
ocimum_basilicum_1953.g72.t1 Terpenoid UGT low borderline UGT__00105__sp_Q9SK82_U85A1_ARATH
ocimum_basilicum_1965.g28.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
ocimum_basilicum_1968.g192.t1 Terpenoid UGT medium pass UGT__00015__sp_A0A193AU77_GGT24_PUNGR
ocimum_basilicum_1968.g194.t1 Terpenoid UGT medium pass UGT__00015__sp_A0A193AU77_GGT24_PUNGR
ocimum_basilicum_1968.g66.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
ocimum_basilicum_1968.g67.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
ocimum_basilicum_1968.g68.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
ocimum_basilicum_1972.g146.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
ocimum_basilicum_1973.g146.t1 Terpenoid UGT medium pass UGT__00067__sp_P0DO74_GT742_SIRGR
ocimum_basilicum_1975.g101.t1 Terpenoid UGT low borderline UGT__00075__sp_Q7Y232_U73B4_ARATH
ocimum_basilicum_1975.g102.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
ocimum_basilicum_1975.g103.t1 Terpenoid UGT low borderline UGT__00057__sp_O81498_U72E3_ARATH
ocimum_basilicum_1980.g75.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
ocimum_basilicum_231800.g2.t1 Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
ocimum_basilicum_302806.g3.t1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
ocimum_basilicum_303058.g2.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
ocimum_basilicum_303128.g1.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
ocimum_basilicum_303128.g2.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
ocimum_basilicum_313904.g2.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
ocimum_basilicum_314159.g2.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
ocimum_basilicum_320734.g1.t1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
ocimum_basilicum_320734.g2.t1 Terpenoid UGT medium pass UGT__00071__sp_Q6VAA6_U74G1_STERE
ocimum_basilicum_343751.g1.t1 Terpenoid UGT medium pass UGT__00015__sp_A0A193AU77_GGT24_PUNGR
ocimum_basilicum_345005.g1.t1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
ocimum_basilicum_347852.g3.t1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
ocimum_basilicum_349.g10.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
ocimum_basilicum_349.g5.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
ocimum_basilicum_350.g10.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
ocimum_basilicum_350.g5.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
ocimum_basilicum_350317.g1.t1 Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
ocimum_basilicum_350317.g2.t1 Terpenoid UGT medium pass UGT__00022__sp_B2XBQ5_85A19_PRUDU
ocimum_basilicum_351016.g1.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
ocimum_basilicum_351016.g2.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
ocimum_basilicum_355682.g1.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
ocimum_basilicum_355970.g2.t1 Terpenoid UGT medium pass UGT__00049__sp_O22820_U74F1_ARATH