PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
ocimum_basilicum_1957.g88.t1 Terpenoid AACT medium borderline
ocimum_basilicum_379745.g8.t1 Terpenoid AACT medium borderline
ocimum_basilicum_380290.g18.t1 Terpenoid AACT medium borderline
ocimum_basilicum_380482.g7.t1 Terpenoid AACT medium borderline
ocimum_basilicum_380484.g4.t1 Terpenoid AACT medium borderline
ocimum_basilicum_381799.g5.t1 Terpenoid AACT low borderline
ocimum_basilicum_383297.g37.t1 Terpenoid AACT low borderline
ocimum_basilicum_383864.g92.t1 Terpenoid AACT medium borderline
ocimum_basilicum_675.g10.t1 Terpenoid AACT low borderline
ocimum_basilicum_686.g52.t1 Terpenoid AACT medium borderline
ocimum_basilicum_704.g135.t1 Terpenoid AACT low borderline
ocimum_basilicum_726.g7.t1 Terpenoid AACT medium borderline
ocimum_basilicum_837.g2.t1 Terpenoid AACT medium borderline
ocimum_basilicum_1023.g246.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1050.g63.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1132.g31.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1136.g13.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1148.g1.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1188.g22.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1197.g27.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1197.g38.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1234.g44.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1242.g25.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1262.g6.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1276.g2.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1276.g3.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1276.g33.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1300.g9.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1320.g20.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1368.g7.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1406.g3.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1432.g18.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1444.g3.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1445.g14.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1530.g1.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1533.g10.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1533.g8.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1548.g7.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1548.g8.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1568.g118.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1583.g2.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1588.g30.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1592.g4.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1593.g64.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1631.g45.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1645.g4.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1702.g33.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1702.g34.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1737.g20.t1 Terpenoid BAHD medium pass
ocimum_basilicum_1782.g1.t1 Terpenoid BAHD medium pass