PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
ocimum_basilicum_384395.g9.t1 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
ocimum_basilicum_384444.g15.t1 Terpenoid BAHD medium pass BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
ocimum_basilicum_384464.g9.t1 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
ocimum_basilicum_384470.g1.t1 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
ocimum_basilicum_384470.g2.t1 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
ocimum_basilicum_384485.g2.t1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
ocimum_basilicum_384596.g100.t1 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
ocimum_basilicum_384596.g101.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384596.g102.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384596.g107.t1 Terpenoid BAHD low borderline BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
ocimum_basilicum_384596.g109.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384596.g11.t1 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
ocimum_basilicum_384596.g110.t1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384596.g111.t1 Terpenoid BAHD low borderline BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
ocimum_basilicum_384596.g14.t1 Terpenoid BAHD low borderline BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
ocimum_basilicum_384596.g86.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384596.g97.t1 Terpenoid BAHD low borderline BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
ocimum_basilicum_384596.g98.t1 Terpenoid BAHD low borderline BAHD__00033__sp_P0DXG0_AT_STRYX
ocimum_basilicum_384596.g99.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384709.g23.t1 Terpenoid BAHD low borderline BAHD__00034__sp_P10349_GPAT2_CUCMO
ocimum_basilicum_384785.g7.t1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
ocimum_basilicum_384808.g10.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
ocimum_basilicum_384808.g11.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384808.g12.t1 Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
ocimum_basilicum_384808.g13.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384808.g14.t1 Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
ocimum_basilicum_384808.g15.t1 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
ocimum_basilicum_384808.g21.t1 Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
ocimum_basilicum_384808.g22.t1 Terpenoid BAHD low borderline BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
ocimum_basilicum_384808.g23.t1 Terpenoid BAHD low borderline BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
ocimum_basilicum_384808.g24.t1 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
ocimum_basilicum_384808.g34.t1 Terpenoid BAHD medium pass BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
ocimum_basilicum_384808.g36.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384808.g37.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384808.g38.t1 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
ocimum_basilicum_384808.g8.t1 Terpenoid BAHD medium pass BAHD__00001__sp_A0A068BGA5_AT1_ACTDE
ocimum_basilicum_384808.g9.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384815.g81.t1 Terpenoid BAHD low borderline BAHD__00075__sp_Q9FJB4_GPC1_ARATH
ocimum_basilicum_384858.g98.t1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
ocimum_basilicum_384868.g28.t1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384917.g25.t1 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
ocimum_basilicum_384917.g54.t1 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
ocimum_basilicum_384917.g70.t1 Terpenoid BAHD low borderline BAHD__00030__sp_O80816_GLC_ARATH
ocimum_basilicum_384917.g71.t1 Terpenoid BAHD medium pass BAHD__00030__sp_O80816_GLC_ARATH
ocimum_basilicum_384917.g8.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
ocimum_basilicum_384917.g9.t1 Terpenoid BAHD low borderline BAHD__00024__sp_O23393_BIA1_ARATH
ocimum_basilicum_384929.g42.t1 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
ocimum_basilicum_384941.g3.t1 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
ocimum_basilicum_384948.g10.t1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
ocimum_basilicum_384969.g43.t1 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA