PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_384195.g41.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_384250.g40.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_384596.g26.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_385855.g63.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_385868.g21.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_385985.g18.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_386141.g11.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_386141.g12.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_452.g116.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_454.g102.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_481.g285.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_538.g63.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_545.g87.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_549.g420.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_557.g8.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_557.g9.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_716.g80.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_716.g81.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_716.g86.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_723.g89.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_738.g91.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_746.g140.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_746.g141.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_746.g144.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_746.g145.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_746.g146.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_746.g147.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_746.g148.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_799.g1.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_799.g2.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1040.g2.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_1221.g13.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_348609.g2.t1 Alkaloid 8HGO low borderline
ocimum_basilicum_350056.g1.t1 Alkaloid 8HGO low borderline
ocimum_basilicum_365888.g1.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_370285.g2.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_371776.g7.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_371776.g8.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_372.g67.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_375441.g6.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_375792.g3.t1 Alkaloid 8HGO low borderline
ocimum_basilicum_376424.g2.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_376424.g3.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_377079.g1.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_378354.g1.t1 Alkaloid 8HGO low borderline
ocimum_basilicum_379019.g6.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_379809.g1.t1 Alkaloid 8HGO medium pass
ocimum_basilicum_380102.g2.t1 Alkaloid 8HGO low borderline
ocimum_basilicum_380367.g35.t1 Alkaloid 8HGO medium borderline
ocimum_basilicum_381167.g22.t1 Alkaloid 8HGO low borderline