PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_647.g43.t1 Alkaloid CNMT low borderline
ocimum_basilicum_746.g130.t1 Alkaloid CNMT low borderline
ocimum_basilicum_1134.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1177.g79.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1188.g74.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1230.g8.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1315.g5.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1422.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1422.g3.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1422.g5.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1630.g60.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1640.g3.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1701.g188.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1720.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1720.g4.t1 Alkaloid CODM/T6ODM medium pass
ocimum_basilicum_1737.g6.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1782.g47.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1821.g44.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1834.g51.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1842.g76.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1842.g77.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1842.g80.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1842.g81.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1842.g83.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1847.g13.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1949.g220.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1957.g10.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1957.g11.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1957.g12.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1965.g7.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1965.g74.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1975.g120.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_1979.g159.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_274683.g2.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_274683.g3.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_303579.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_337627.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_365580.g2.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_370351.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_370703.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_371977.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_372357.g3.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_375837.g1.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_376041.g14.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_376558.g6.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_376710.g2.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_376710.g3.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_377.g79.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_378.g118.t1 Alkaloid CODM/T6ODM medium borderline
ocimum_basilicum_379.g14.t1 Alkaloid CODM/T6ODM medium borderline