PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_704.g73.t1 Terpenoid BAHD medium pass
ocimum_basilicum_704.g75.t1 Terpenoid BAHD medium pass
ocimum_basilicum_704.g76.t1 Terpenoid BAHD medium pass
ocimum_basilicum_706.g53.t1 Terpenoid BAHD medium pass
ocimum_basilicum_707.g37.t1 Terpenoid BAHD medium pass
ocimum_basilicum_707.g78.t1 Terpenoid BAHD medium pass
ocimum_basilicum_709.g6.t1 Terpenoid BAHD medium pass
ocimum_basilicum_710.g72.t1 Terpenoid BAHD medium pass
ocimum_basilicum_710.g84.t1 Terpenoid BAHD low borderline
ocimum_basilicum_714.g40.t1 Terpenoid BAHD medium pass
ocimum_basilicum_716.g99.t1 Terpenoid BAHD medium pass
ocimum_basilicum_718.g3.t1 Terpenoid BAHD medium pass
ocimum_basilicum_718.g4.t1 Terpenoid BAHD medium pass
ocimum_basilicum_718.g41.t1 Terpenoid BAHD medium pass
ocimum_basilicum_719.g14.t1 Terpenoid BAHD medium pass
ocimum_basilicum_725.g45.t1 Terpenoid BAHD medium pass
ocimum_basilicum_731.g32.t1 Terpenoid BAHD low borderline
ocimum_basilicum_732.g113.t1 Terpenoid BAHD medium pass
ocimum_basilicum_732.g78.t1 Terpenoid BAHD low borderline
ocimum_basilicum_733.g13.t1 Terpenoid BAHD medium pass
ocimum_basilicum_737.g92.t1 Terpenoid BAHD medium pass
ocimum_basilicum_745.g14.t1 Terpenoid BAHD medium pass
ocimum_basilicum_746.g109.t1 Terpenoid BAHD medium pass
ocimum_basilicum_746.g14.t1 Terpenoid BAHD medium pass
ocimum_basilicum_746.g79.t1 Terpenoid BAHD low borderline
ocimum_basilicum_746.g80.t1 Terpenoid BAHD low borderline
ocimum_basilicum_749.g209.t1 Terpenoid BAHD low borderline
ocimum_basilicum_751.g24.t1 Terpenoid BAHD low borderline
ocimum_basilicum_751.g3.t1 Terpenoid BAHD low borderline
ocimum_basilicum_751.g7.t1 Terpenoid BAHD low borderline
ocimum_basilicum_751.g8.t1 Terpenoid BAHD low borderline
ocimum_basilicum_754.g88.t1 Terpenoid BAHD medium pass
ocimum_basilicum_757.g105.t1 Terpenoid BAHD medium pass
ocimum_basilicum_757.g240.t1 Terpenoid BAHD low borderline
ocimum_basilicum_757.g4.t1 Terpenoid BAHD medium pass
ocimum_basilicum_757.g62.t1 Terpenoid BAHD medium pass
ocimum_basilicum_805.g53.t1 Terpenoid BAHD medium pass
ocimum_basilicum_853.g15.t1 Terpenoid BAHD medium pass
ocimum_basilicum_853.g16.t1 Terpenoid BAHD low borderline
ocimum_basilicum_888.g62.t1 Terpenoid BAHD low borderline
ocimum_basilicum_899.g99.t1 Terpenoid BAHD medium pass
ocimum_basilicum_935.g142.t1 Terpenoid BAHD medium pass
ocimum_basilicum_950.g7.t1 Terpenoid BAHD medium pass
ocimum_basilicum_977.g7.t1 Terpenoid BAHD low borderline
ocimum_basilicum_989.g25.t1 Terpenoid BAHD low borderline
ocimum_basilicum_993.g5.t1 Terpenoid BAHD low borderline
ocimum_basilicum_1102.g10.t1 Terpenoid CMK/IspE medium pass
ocimum_basilicum_381927.g1.t1 Terpenoid CMK/IspE high pass
ocimum_basilicum_385304.g11.t1 Terpenoid CMK/IspE low borderline
ocimum_basilicum_1023.g112.t1 Terpenoid CYP71 medium pass