PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_383905.g138.t1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_383957.g100.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_383957.g101.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_383957.g102.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_383957.g122.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_384250.g30.t1 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
ocimum_basilicum_384815.g99.t1 Flavonoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
ocimum_basilicum_384948.g79.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_385428.g31.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_385488.g15.t1 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
ocimum_basilicum_385505.g88.t1 Flavonoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
ocimum_basilicum_386032.g1.t1 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_386050.g130.t1 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
ocimum_basilicum_386129.g53.t1 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_386129.g57.t1 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_386152.g6.t1 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
ocimum_basilicum_386161.g33.t1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_386161.g37.t1 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_453.g137.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_453.g155.t1 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
ocimum_basilicum_453.g161.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_470.g45.t1 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
ocimum_basilicum_473752.g4.t1 Flavonoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
ocimum_basilicum_473753.g4.t1 Flavonoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
ocimum_basilicum_499.g46.t1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_501.g40.t1 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
ocimum_basilicum_501.g9.t1 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_514.g38.t1 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
ocimum_basilicum_518.g58.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_538.g72.t1 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
ocimum_basilicum_539.g92.t1 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
ocimum_basilicum_547.g320.t1 Flavonoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
ocimum_basilicum_547.g321.t1 Flavonoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
ocimum_basilicum_548564.g6.t1 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
ocimum_basilicum_548565.g7.t1 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
ocimum_basilicum_549.g135.t1 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_549.g398.t1 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
ocimum_basilicum_550.g74.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_550.g75.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_550.g91.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_551.g95.t1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_568.g84.t1 Flavonoid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
ocimum_basilicum_570249.g1.t1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_570251.g1.t1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_652.g42.t1 Flavonoid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
ocimum_basilicum_683.g57.t1 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_693.g42.t1 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
ocimum_basilicum_696.g26.t1 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
ocimum_basilicum_696.g60.t1 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_710.g70.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY