PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_564.g116.t1 Phenylpropanoid C4H/CYP73A low borderline
ocimum_basilicum_564.g99.t1 Phenylpropanoid C4H/CYP73A low borderline
ocimum_basilicum_570426.g1.t1 Phenylpropanoid C4H/CYP73A low borderline
ocimum_basilicum_656.g57.t1 Phenylpropanoid C4H/CYP73A low borderline
ocimum_basilicum_710.g82.t1 Phenylpropanoid C4H/CYP73A medium borderline
ocimum_basilicum_716.g54.t1 Phenylpropanoid C4H/CYP73A low borderline
ocimum_basilicum_749.g28.t1 Phenylpropanoid C4H/CYP73A low borderline
ocimum_basilicum_755.g46.t1 Phenylpropanoid C4H/CYP73A low borderline
ocimum_basilicum_1032.g14.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1040.g2.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1050.g32.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1050.g33.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1050.g36.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1151.g5.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1175.g12.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1231.g2.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1242.g52.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1355.g2.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1359.g21.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1503.g10.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1503.g11.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1521.g15.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1593.g71.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1703.g3.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1722.g4.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1722.g6.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1845.g63.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1845.g65.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1852.g18.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1873.g23.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1873.g27.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1886.g76.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1886.g77.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1886.g78.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1886.g79.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1886.g84.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1886.g85.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1886.g86.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1897.g1.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1897.g2.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1897.g8.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1908.g35.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1913.g46.t1 Phenylpropanoid CAD low borderline
ocimum_basilicum_1940.g11.t1 Phenylpropanoid CAD medium pass
ocimum_basilicum_1961.g63.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1972.g131.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1972.g132.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1972.g133.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_1972.g27.t1 Phenylpropanoid CAD medium borderline
ocimum_basilicum_307925.g1.t1 Phenylpropanoid CAD low borderline