PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_450.g54.t1 Flavonoid IFR low borderline
ocimum_basilicum_453.g172.t1 Flavonoid IFR low borderline
ocimum_basilicum_455.g4.t1 Flavonoid IFR low borderline
ocimum_basilicum_513.g17.t1 Flavonoid IFR low borderline
ocimum_basilicum_546.g10.t1 Flavonoid IFR medium pass
ocimum_basilicum_549.g62.t1 Flavonoid IFR low borderline
ocimum_basilicum_556.g134.t1 Flavonoid IFR high pass
ocimum_basilicum_558.g198.t1 Flavonoid IFR low borderline
ocimum_basilicum_668.g100.t1 Flavonoid IFR high pass
ocimum_basilicum_668.g96.t1 Flavonoid IFR high pass
ocimum_basilicum_712.g93.t1 Flavonoid IFR medium pass
ocimum_basilicum_714.g90.t1 Flavonoid IFR low borderline
ocimum_basilicum_716.g93.t1 Flavonoid IFR low borderline
ocimum_basilicum_740.g29.t1 Flavonoid IFR high pass
ocimum_basilicum_743.g24.t1 Flavonoid IFR low borderline
ocimum_basilicum_747.g2.t1 Flavonoid IFR low borderline
ocimum_basilicum_805.g74.t1 Flavonoid IFR high pass
ocimum_basilicum_813.g5.t1 Flavonoid IFR low borderline
ocimum_basilicum_829.g7.t1 Flavonoid IFR low borderline
ocimum_basilicum_1024.g13.t1 Flavonoid IFS low borderline
ocimum_basilicum_1024.g15.t1 Flavonoid IFS low borderline
ocimum_basilicum_1032.g39.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1050.g5.t1 Flavonoid IFS low borderline
ocimum_basilicum_1081.g6.t1 Flavonoid IFS low borderline
ocimum_basilicum_1083.g1.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1083.g4.t1 Flavonoid IFS low borderline
ocimum_basilicum_1083.g5.t1 Flavonoid IFS low borderline
ocimum_basilicum_1130.g1.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1130.g4.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1159.g5.t1 Flavonoid IFS low borderline
ocimum_basilicum_1168.g3.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1179.g15.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1179.g16.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1209.g9.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1344.g10.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1344.g11.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1356.g2.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1356.g3.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1362.g4.t1 Flavonoid IFS low borderline
ocimum_basilicum_1385.g14.t1 Flavonoid IFS low borderline
ocimum_basilicum_1385.g21.t1 Flavonoid IFS low borderline
ocimum_basilicum_1521.g17.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1551.g114.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1551.g115.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1560.g78.t1 Flavonoid IFS low borderline
ocimum_basilicum_1568.g34.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1583.g16.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1583.g33.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1583.g37.t1 Flavonoid IFS medium borderline
ocimum_basilicum_1593.g22.t1 Flavonoid IFS medium borderline