PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
ocimum_basilicum_325279.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_346423.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_347838.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_349575.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_349575.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_351578.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_353691.g1.t1 Steroid BR6OX2/CYP85A2 medium borderline
ocimum_basilicum_354132.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_360142.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_363376.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_364613.g3.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_364722.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_366412.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_366495.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_366918.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_366964.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_368003.g3.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_369208.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_370163.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_370842.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_371177.g3.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_371247.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_371953.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_371956.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_372726.g3.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_372726.g5.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_373295.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_373414.g5.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_373573.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_375145.g8.t1 Steroid BR6OX2/CYP85A2 medium borderline
ocimum_basilicum_375493.g7.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_376.g61.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_376328.g5.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_376328.g7.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_376636.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_377399.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_378351.g8.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_378949.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_379741.g4.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_380210.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_380227.g21.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_380390.g2.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_380515.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_380829.g3.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_380877.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_380927.g1.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_381158.g6.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_381334.g7.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_381334.g9.t1 Steroid BR6OX2/CYP85A2 low borderline
ocimum_basilicum_381419.g24.t1 Steroid BR6OX2/CYP85A2 low borderline