PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_379064.g1.t1 Phenylpropanoid CSE low borderline
ocimum_basilicum_379275.g1.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_380370.g16.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_382447.g28.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_382847.g42.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_382848.g49.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_383058.g3.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_383254.g59.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_383641.g28.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_383942.g2.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_383942.g3.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_384250.g162.t1 Phenylpropanoid CSE low borderline
ocimum_basilicum_384250.g168.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_384250.g169.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_384250.g170.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_384250.g173.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_384250.g176.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_384962.g7.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_385219.g4.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_385346.g97.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_385378.g7.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_385469.g65.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_386100.g59.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_447.g25.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_480569.g3.t1 Phenylpropanoid CSE low borderline
ocimum_basilicum_481.g233.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_481.g234.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_506.g189.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_543.g64.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_543.g68.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_543.g75.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_543.g76.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_543.g77.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_543.g79.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_543.g80.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_546711.g1.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_546712.g1.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_548344.g6.t1 Phenylpropanoid CSE low borderline
ocimum_basilicum_548345.g6.t1 Phenylpropanoid CSE low borderline
ocimum_basilicum_675.g15.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_681.g74.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_715.g47.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_757.g208.t1 Phenylpropanoid CSE medium pass
ocimum_basilicum_1003.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1102.g6.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1259.g1.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1292.g49.t1 Phenylpropanoid F5H/CYP84A low borderline
ocimum_basilicum_1538.g4.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1945.g15.t1 Phenylpropanoid F5H/CYP84A medium borderline
ocimum_basilicum_1945.g38.t1 Phenylpropanoid F5H/CYP84A medium borderline