PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_501078.g1.t1 Phenylpropanoid LAC low borderline
ocimum_basilicum_506.g138.t1 Phenylpropanoid LAC low borderline
ocimum_basilicum_506.g20.t1 Phenylpropanoid LAC low borderline
ocimum_basilicum_506.g21.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_506.g22.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_506.g23.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_507.g9.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_515.g91.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_558.g149.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_569.g108.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_569996.g2.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_569997.g2.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_660.g78.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_676.g1.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_676.g2.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_676.g4.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_676.g6.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_690.g3.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_703.g30.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_703.g31.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_703.g32.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_703.g33.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_708.g129.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_712.g94.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_724.g31.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_731.g53.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_747.g54.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_748.g62.t1 Phenylpropanoid LAC low borderline
ocimum_basilicum_750.g19.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_750.g22.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_750.g23.t1 Phenylpropanoid LAC low borderline
ocimum_basilicum_750.g26.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_750.g27.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_813.g10.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_813.g12.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_813.g14.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_821.g5.t1 Phenylpropanoid LAC low borderline
ocimum_basilicum_857.g1.t1 Phenylpropanoid LAC medium pass
ocimum_basilicum_1377.g34.t1 Phenylpropanoid PAL low borderline
ocimum_basilicum_1533.g24.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_1533.g37.t1 Phenylpropanoid PAL medium pass
ocimum_basilicum_1533.g42.t1 Phenylpropanoid PAL medium pass
ocimum_basilicum_1534.g5.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_381677.g70.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_383331.g115.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_384144.g1.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_384144.g3.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_447.g89.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_504.g148.t1 Phenylpropanoid PAL high pass
ocimum_basilicum_699.g65.t1 Phenylpropanoid PAL medium pass