PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
ocimum_basilicum_567.g40.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_691.g51.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_701.g168.t1 Alkaloid SLS low borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_746.g139.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_746.g142.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_746.g143.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_752.g163.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_757.g206.t1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
ocimum_basilicum_789.g31.t1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
ocimum_basilicum_789.g9.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_865.g13.t1 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
ocimum_basilicum_923.g12.t1 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
ocimum_basilicum_1023.g135.t1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
ocimum_basilicum_1168.g2.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1177.g32.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1177.g34.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1177.g71.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1188.g51.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1188.g53.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1197.g41.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1533.g51.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1533.g52.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1590.g16.t1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1601.g71.t1 Alkaloid STR medium pass STR__00002__sp_P68175_STSY_RAUSE
ocimum_basilicum_1721.g10.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1735.g17.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1828.g42.t1 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
ocimum_basilicum_1851.g2.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1862.g26.t1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1867.g87.t1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1873.g96.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1889.g4.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1897.g53.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1899.g13.t1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1947.g41.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1968.g142.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_1979.g91.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_319531.g2.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_348613.g3.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_362136.g4.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_374511.g3.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_375563.g7.t1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_375625.g2.t1 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_377032.g3.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_377032.g4.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_379.g184.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_380.g59.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_380390.g15.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_381291.g18.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
ocimum_basilicum_381379.g4.t1 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR