PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
oryza_coarctata_PC_14693 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_14941 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_14942 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_15436 Steroid DWF4/CYP90B1 medium borderline
oryza_coarctata_PC_16336 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_16365 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_18026 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_18470 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_18856 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_19170 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_19852 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_22235 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_22984 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_24200 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_24889 Steroid DWF4/CYP90B1 medium borderline
oryza_coarctata_PC_25381 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_26862 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_27075 Steroid DWF4/CYP90B1 medium borderline
oryza_coarctata_PC_28963 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_31241 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_31243 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_32995 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_34682 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_35334 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_38186 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_38778 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_39913 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_39925 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_40640 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_40779 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_41985 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_42745 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_43488 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_44005 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_44758 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_46339 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_47669 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_48620 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_49188 Steroid DWF4/CYP90B1 low borderline
oryza_coarctata_PC_24063 Steroid DWF5 medium borderline
oryza_coarctata_PC_31312 Steroid DWF5 medium borderline
oryza_coarctata_PC_12049 Steroid DWF7 medium pass
oryza_coarctata_PC_20999 Steroid DWF7 low borderline
oryza_coarctata_PC_31249 Steroid DWF7 medium pass
oryza_coarctata_PC_22587 Steroid HYD1 high pass
oryza_coarctata_PC_17647 Steroid ROT3/CYP90C1 low borderline
oryza_coarctata_PC_42627 Steroid ROT3/CYP90C1 medium borderline
oryza_coarctata_PC_44694 Steroid ROT3/CYP90C1 medium borderline
oryza_coarctata_PC_07582 Steroid SMO1/SMO2 medium pass
oryza_coarctata_PC_22253 Steroid SMO1/SMO2 medium pass