PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
KN539580.1_FGP003 Alkaloid 7DLGT low borderline
KN539580.1_FGP004 Alkaloid 7DLGT medium pass
KN539644.1_FGP005 Alkaloid 7DLGT medium pass
KN539685.1_FGP001 Alkaloid 7DLGT medium pass
KN539758.1_FGP004 Alkaloid 7DLGT high pass
KN539758.1_FGP006 Alkaloid 7DLGT medium pass
KN539822.1_FGP007 Alkaloid 7DLGT medium pass
KN539906.1_FGP003 Alkaloid 7DLGT low borderline
KN539906.1_FGP004 Alkaloid 7DLGT low borderline
KN539906.1_FGP007 Alkaloid 7DLGT low borderline
KN539909.1_FGP002 Alkaloid 7DLGT low borderline
KN539932.1_FGP001 Alkaloid 7DLGT medium pass
KN539944.1_FGP004 Alkaloid 7DLGT low borderline
KN540013.1_FGP003 Alkaloid 7DLGT medium pass
KN540069.1_FGP002 Alkaloid 7DLGT low borderline
KN540069.1_FGP006 Alkaloid 7DLGT medium pass
KN540078.1_FGP002 Alkaloid 7DLGT medium pass
KN540078.1_FGP006 Alkaloid 7DLGT low borderline
KN540078.1_FGP008 Alkaloid 7DLGT high pass
KN540118.1_FGP002 Alkaloid 7DLGT medium pass
KN540186.1_FGP001 Alkaloid 7DLGT low borderline
KN540186.1_FGP002 Alkaloid 7DLGT medium pass
KN540186.1_FGP006 Alkaloid 7DLGT medium pass
KN540186.1_FGP008 Alkaloid 7DLGT low borderline
KN540194.1_FGP005 Alkaloid 7DLGT low borderline
KN540269.1_FGP005 Alkaloid 7DLGT medium pass
KN540297.1_FGP002 Alkaloid 7DLGT low borderline
KN540297.1_FGP005 Alkaloid 7DLGT low borderline
KN540334.1_FGP003 Alkaloid 7DLGT medium pass
KN540336.1_FGP001 Alkaloid 7DLGT low borderline
KN540522.1_FGP003 Alkaloid 7DLGT medium pass
KN540540.1_FGP006 Alkaloid 7DLGT medium pass
KN540620.1_FGP001 Alkaloid 7DLGT low borderline
KN540620.1_FGP002 Alkaloid 7DLGT medium pass
KN540620.1_FGP008 Alkaloid 7DLGT medium pass
KN540666.1_FGP002 Alkaloid 7DLGT low borderline
KN540728.1_FGP003 Alkaloid 7DLGT low borderline
KN540785.1_FGP004 Alkaloid 7DLGT low borderline
KN540812.1_FGP002 Alkaloid 7DLGT medium pass
KN540812.1_FGP005 Alkaloid 7DLGT low borderline
KN540823.1_FGP002 Alkaloid 7DLGT low borderline
KN540823.1_FGP005 Alkaloid 7DLGT medium pass
KN540835.1_FGP001 Alkaloid 7DLGT low borderline
KN540849.1_FGP003 Alkaloid 7DLGT low borderline
KN540941.1_FGP001 Alkaloid 7DLGT high pass
KN541011.1_FGP001 Alkaloid 7DLGT low borderline
KN541011.1_FGP002 Alkaloid 7DLGT medium pass
KN541032.1_FGP001 Alkaloid 7DLGT low borderline
KN541150.1_FGP002 Alkaloid 7DLGT low borderline
KN541168.1_FGP003 Alkaloid 7DLGT low borderline