PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
KN541197.1_FGP001 Alkaloid 7DLGT low borderline
KN541218.1_FGP001 Alkaloid 7DLGT medium pass
KN541218.1_FGP002 Alkaloid 7DLGT medium pass
KN541274.1_FGP002 Alkaloid 7DLGT medium pass
KN541328.1_FGP002 Alkaloid 7DLGT low borderline
KN541345.1_FGP003 Alkaloid 7DLGT high pass
KN541663.1_FGP001 Alkaloid 7DLGT low borderline
KN541737.1_FGP001 Alkaloid 7DLGT low borderline
KN541737.1_FGP004 Alkaloid 7DLGT medium pass
KN541810.1_FGP001 Alkaloid 7DLGT low borderline
KN541810.1_FGP002 Alkaloid 7DLGT low borderline
KN541956.1_FGP004 Alkaloid 7DLGT low borderline
KN542037.1_FGP001 Alkaloid 7DLGT medium pass
KN542050.1_FGP001 Alkaloid 7DLGT medium pass
KN542050.1_FGP003 Alkaloid 7DLGT medium pass
KN542170.1_FGP002 Alkaloid 7DLGT medium pass
KN542502.1_FGP001 Alkaloid 7DLGT high pass
KN542809.1_FGP001 Alkaloid 7DLGT medium pass
KN543125.1_FGP001 Alkaloid 7DLGT low borderline
KN543125.1_FGP002 Alkaloid 7DLGT medium pass
KN543839.1_FGP001 Alkaloid 7DLGT medium pass
KN544251.1_FGP001 Alkaloid 7DLGT low borderline
KN544513.1_FGP001 Alkaloid 7DLGT low borderline
AMDW01033660.1_FGP001 Alkaloid 7DLH low borderline
AMDW01040506.1_FGP001 Alkaloid 7DLH medium borderline
KN538750.1_FGP014 Alkaloid 7DLH medium borderline
KN538750.1_FGP018 Alkaloid 7DLH medium borderline
KN538816.1_FGP006 Alkaloid 7DLH medium borderline
KN538816.1_FGP011 Alkaloid 7DLH medium borderline
KN538838.1_FGP001 Alkaloid 7DLH low borderline
KN538864.1_FGP051 Alkaloid 7DLH low borderline
KN538956.1_FGP016 Alkaloid 7DLH medium pass
KN538977.1_FGP003 Alkaloid 7DLH medium borderline
KN539088.1_FGP006 Alkaloid 7DLH low borderline
KN539320.1_FGP001 Alkaloid 7DLH low borderline
KN539549.1_FGP002 Alkaloid 7DLH medium borderline
KN539604.1_FGP007 Alkaloid 7DLH medium borderline
KN540202.1_FGP002 Alkaloid 7DLH medium borderline
KN540245.1_FGP001 Alkaloid 7DLH medium borderline
KN540648.1_FGP001 Alkaloid 7DLH low borderline
KN540664.1_FGP001 Alkaloid 7DLH medium borderline
KN540714.1_FGP001 Alkaloid 7DLH low borderline
KN542154.1_FGP001 Alkaloid 7DLH medium borderline
KN542884.1_FGP002 Alkaloid 7DLH medium borderline
KN546147.1_FGP001 Alkaloid 7DLH low borderline
AMDW01040320.1_FGP001 Alkaloid 8HGO low borderline
KN538688.1_FGP045 Alkaloid 8HGO low borderline
KN538733.1_FGP002 Alkaloid 8HGO medium pass
KN538733.1_FGP023 Alkaloid 8HGO medium borderline
KN538847.1_FGP039 Alkaloid 8HGO low borderline