PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Osat11G0016840.1 Alkaloid GES medium pass
Osat11G0016840.2 Alkaloid GES medium pass
Osat11G0016840.3 Alkaloid GES medium pass
Osat12G0017200.1 Alkaloid GES low borderline
Osat12G0017210.1 Alkaloid GES medium pass
Osat12G0017230.1 Alkaloid GES medium pass
Osat12G0017230.2 Alkaloid GES medium pass
Osat01G0037100.1 Alkaloid GS low borderline
Osat02G0007020.1 Alkaloid GS high pass
Osat02G0024450.1 Alkaloid GS low borderline
Osat02G0024450.2 Alkaloid GS low borderline
Osat02G0041360.1 Alkaloid GS low borderline
Osat03G0000170.1 Alkaloid GS low borderline
Osat03G0009440.1 Alkaloid GS high pass
Osat04G0000380.1 Alkaloid GS low borderline
Osat04G0007070.1 Alkaloid GS high pass
Osat04G0013450.1 Alkaloid GS low borderline
Osat04G0013500.1 Alkaloid GS low borderline
Osat04G0013540.1 Alkaloid GS low borderline
Osat04G0014320.1 Alkaloid GS low borderline
Osat04G0031220.1 Alkaloid GS high pass
Osat05G0013620.1 Alkaloid GS low borderline
Osat08G0000680.1 Alkaloid GS medium pass
Osat08G0011240.1 Alkaloid GS high pass
Osat08G0017270.1 Alkaloid GS low borderline
Osat08G0028340.1 Alkaloid GS medium pass
Osat08G0028340.2 Alkaloid GS medium pass
Osat09G0012210.1 Alkaloid GS high pass
Osat09G0012220.1 Alkaloid GS high pass
Osat09G0012230.1 Alkaloid GS high pass
Osat09G0012230.2 Alkaloid GS high pass
Osat09G0012240.1 Alkaloid GS high pass
Osat09G0019210.1 Alkaloid GS low borderline
Osat09G0019260.1 Alkaloid GS low borderline
Osat09G0019270.1 Alkaloid GS low borderline
Osat10G0006130.1 Alkaloid GS high pass
Osat10G0006130.2 Alkaloid GS high pass
Osat10G0006130.3 Alkaloid GS high pass
Osat10G0014510.1 Alkaloid GS high pass
Osat10G0023410.1 Alkaloid GS low borderline
Osat11G0000820.1 Alkaloid GS low borderline
Osat11G0025160.1 Alkaloid GS high pass
Osat01G0016450.1 Alkaloid H6H low borderline
Osat01G0036470.1 Alkaloid H6H low borderline
Osat01G0042620.1 Alkaloid H6H low borderline
Osat01G0042770.1 Alkaloid H6H medium borderline
Osat01G0042770.2 Alkaloid H6H medium borderline
Osat01G0042770.3 Alkaloid H6H medium borderline
Osat01G0042770.4 Alkaloid H6H medium borderline
Osat01G0046510.1 Alkaloid H6H high pass