PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status Best Target
Osat02G0034940.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat04G0035210.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat04G0035310.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010390.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010460.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010510.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010520.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010580.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010590.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010590.2 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010590.3 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010590.4 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0010590.5 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0014860.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0014890.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat06G0015890.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat11G0010770.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat11G0010800.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat11G0010830.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat11G0010840.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat11G0010910.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Osat11G0010940.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO