PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Osat01G0006470.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0009720.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0016970.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0017590.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0024220.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0028570.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0033460.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0040660.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0040720.1 Steroid BR6OX2/CYP85A2 low borderline
Osat01G0044360.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0000740.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0006750.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0006800.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0006840.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0006870.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0006880.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0006930.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0006940.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0009620.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0009620.2 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0020340.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0024550.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0024570.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0024590.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0024700.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0026410.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0026410.2 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0031370.1 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0031370.2 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0033750.2 Steroid BR6OX2/CYP85A2 low borderline
Osat02G0033750.3 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0002770.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0003080.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0003200.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0005350.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0011250.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0023040.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0027110.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0027190.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0027820.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0030570.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0033730.1 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0033730.2 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0033730.3 Steroid BR6OX2/CYP85A2 low borderline
Osat03G0033730.4 Steroid BR6OX2/CYP85A2 low borderline
Osat04G0000040.1 Steroid BR6OX2/CYP85A2 low borderline
Osat04G0000040.2 Steroid BR6OX2/CYP85A2 low borderline
Osat04G0027410.1 Steroid BR6OX2/CYP85A2 low borderline
Osat04G0028390.1 Steroid BR6OX2/CYP85A2 low borderline
Osat05G0006150.1 Steroid BR6OX2/CYP85A2 low borderline