PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Osat01G0017590.1 Flavonoid FNS medium borderline
Osat01G0023090.1 Flavonoid FNS medium borderline
Osat01G0023090.2 Flavonoid FNS medium borderline
Osat01G0023090.3 Flavonoid FNS medium borderline
Osat02G0000840.1 Flavonoid FNS low borderline
Osat02G0005760.1 Flavonoid FNS medium borderline
Osat02G0005760.2 Flavonoid FNS medium borderline
Osat02G0005760.3 Flavonoid FNS medium borderline
Osat02G0005760.4 Flavonoid FNS medium borderline
Osat02G0005760.5 Flavonoid FNS medium borderline
Osat02G0006810.1 Flavonoid FNS medium borderline
Osat02G0006810.2 Flavonoid FNS medium borderline
Osat02G0009620.1 Flavonoid FNS medium borderline
Osat02G0009620.2 Flavonoid FNS medium borderline
Osat02G0016030.1 Flavonoid FNS medium borderline
Osat02G0020410.1 Flavonoid FNS medium borderline
Osat02G0031930.1 Flavonoid FNS medium borderline
Osat03G0025200.1 Flavonoid FNS low borderline
Osat03G0027820.1 Flavonoid FNS medium borderline
Osat03G0038510.1 Flavonoid FNS medium borderline
Osat03G0044290.1 Flavonoid FNS medium borderline
Osat04G0000040.2 Flavonoid FNS medium borderline
Osat04G0001670.1 Flavonoid FNS medium borderline
Osat04G0026020.1 Flavonoid FNS medium borderline
Osat05G0006150.1 Flavonoid FNS medium borderline
Osat05G0016400.1 Flavonoid FNS low borderline
Osat05G0020030.1 Flavonoid FNS medium borderline
Osat06G0011980.1 Flavonoid FNS medium borderline
Osat06G0014540.1 Flavonoid FNS low borderline
Osat06G0023390.1 Flavonoid FNS medium borderline
Osat06G0023580.1 Flavonoid FNS medium borderline
Osat06G0023660.1 Flavonoid FNS medium borderline
Osat06G0023660.3 Flavonoid FNS medium borderline
Osat06G0028170.1 Flavonoid FNS medium borderline
Osat06G0028170.2 Flavonoid FNS medium borderline
Osat06G0028170.3 Flavonoid FNS medium borderline
Osat07G0020250.1 Flavonoid FNS medium borderline
Osat07G0023590.1 Flavonoid FNS medium borderline
Osat08G0000440.1 Flavonoid FNS medium borderline
Osat09G0009830.1 Flavonoid FNS low borderline
Osat10G0004820.1 Flavonoid FNS medium pass
Osat10G0010970.1 Flavonoid FNS medium borderline
Osat10G0020090.1 Flavonoid FNS medium borderline
Osat11G0019220.1 Flavonoid FNS medium borderline