PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Osat04G0031170.1 Steroid CAS medium pass
Osat05G0009790.1 Steroid CAS medium pass
Osat06G0003790.1 Steroid CAS medium pass
Osat06G0003800.1 Steroid CAS medium pass
Osat06G0018690.1 Steroid CAS medium pass
Osat06G0023320.1 Steroid CAS medium pass
Osat06G0023330.1 Steroid CAS medium pass
Osat06G0023340.1 Steroid CAS medium pass
Osat06G0023350.1 Steroid CAS medium pass
Osat06G0023360.1 Steroid CAS medium pass
Osat07G0008670.1 Steroid CAS low borderline
Osat09G0006960.1 Steroid CAS medium pass
Osat11G0006630.1 Steroid CAS medium pass
Osat11G0012410.1 Steroid CAS medium pass
Osat11G0012450.1 Steroid CAS medium pass
Osat11G0012470.1 Steroid CAS medium pass
Osat11G0012480.1 Steroid CAS medium pass
Osat11G0012480.2 Steroid CAS medium pass
Osat11G0012480.3 Steroid CAS medium pass
Osat11G0016840.1 Steroid CAS medium pass
Osat11G0016840.2 Steroid CAS medium pass
Osat11G0016840.3 Steroid CAS medium pass
Osat11G0021490.1 Steroid CAS medium pass
Osat12G0017210.1 Steroid CAS medium pass
Osat12G0017230.1 Steroid CAS medium pass
Osat12G0017230.2 Steroid CAS medium pass
Osat12G0026260.1 Steroid CAS medium pass
Osat12G0026260.2 Steroid CAS medium pass
Osat01G0006480.1 Steroid CPD/CYP90A1 low borderline
Osat01G0040640.1 Steroid CPD/CYP90A1 low borderline
Osat01G0040670.1 Steroid CPD/CYP90A1 low borderline
Osat01G0051370.1 Steroid CPD/CYP90A1 low borderline
Osat02G0012790.1 Steroid CPD/CYP90A1 low borderline
Osat03G0009430.1 Steroid CPD/CYP90A1 low borderline
Osat03G0025650.1 Steroid CPD/CYP90A1 medium borderline
Osat03G0031150.1 Steroid CPD/CYP90A1 low borderline
Osat04G0028390.2 Steroid CPD/CYP90A1 low borderline
Osat05G0014150.1 Steroid CPD/CYP90A1 medium borderline
Osat06G0013790.1 Steroid CPD/CYP90A1 medium borderline
Osat06G0030890.1 Steroid CPD/CYP90A1 low borderline
Osat07G0018320.1 Steroid CPD/CYP90A1 low borderline
Osat07G0020130.1 Steroid CPD/CYP90A1 medium borderline
Osat07G0020130.2 Steroid CPD/CYP90A1 medium borderline
Osat07G0020130.3 Steroid CPD/CYP90A1 medium borderline
Osat07G0020130.4 Steroid CPD/CYP90A1 medium borderline
Osat07G0020170.1 Steroid CPD/CYP90A1 medium borderline
Osat07G0020170.3 Steroid CPD/CYP90A1 medium borderline
Osat08G0028580.1 Steroid CPD/CYP90A1 medium borderline
Osat10G0004500.1 Steroid CPD/CYP90A1 medium borderline
Osat10G0004530.1 Steroid CPD/CYP90A1 low borderline