PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
quercus_lobata_QL04p042386 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p042430 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p042468 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p045648 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p047806 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p049277 Alkaloid 7DLGT medium pass
quercus_lobata_QL04p049342 Alkaloid 7DLGT high pass
quercus_lobata_QL04p054495 Alkaloid 7DLGT medium pass
quercus_lobata_QL04p054573 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p054653 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p054809 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p054856 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p054920 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p056416 Alkaloid 7DLGT medium pass
quercus_lobata_QL04p061291 Alkaloid 7DLGT medium pass
quercus_lobata_QL04p061328 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p063041 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p063071 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p063190 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p063315 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p065110 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p080767 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p080788 Alkaloid 7DLGT low borderline
quercus_lobata_QL04p096082 Alkaloid 7DLGT medium pass
quercus_lobata_QL04p096262 Alkaloid 7DLGT medium pass
quercus_lobata_QL05p003183 Alkaloid 7DLGT medium pass
quercus_lobata_QL05p016916 Alkaloid 7DLGT low borderline
quercus_lobata_QL05p043558 Alkaloid 7DLGT low borderline
quercus_lobata_QL05p083115 Alkaloid 7DLGT low borderline
quercus_lobata_QL05p083127 Alkaloid 7DLGT low borderline
quercus_lobata_QL05p083149 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p006413 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007788 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007817 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007824 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007874 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007880 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007920 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007950 Alkaloid 7DLGT medium pass
quercus_lobata_QL06p007958 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007967 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p007972 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p021556 Alkaloid 7DLGT medium pass
quercus_lobata_QL06p035100 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p035957 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p035970 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p035989 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p036026 Alkaloid 7DLGT low borderline
quercus_lobata_QL06p036037 Alkaloid 7DLGT medium pass
quercus_lobata_QL06p036057 Alkaloid 7DLGT low borderline