PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
XP_023895388.1 Phenylpropanoid 4CL medium pass
XP_023897014.1 Phenylpropanoid 4CL medium pass
XP_023898245.1 Phenylpropanoid 4CL low borderline
XP_023898246.1 Phenylpropanoid 4CL medium pass
XP_023899456.1 Phenylpropanoid 4CL low borderline
XP_023899801.1 Phenylpropanoid 4CL low borderline
XP_023900021.1 Phenylpropanoid 4CL medium pass
XP_023900649.1 Phenylpropanoid 4CL low borderline
XP_023900978.1 Phenylpropanoid 4CL low borderline
XP_023902846.1 Phenylpropanoid 4CL low borderline
XP_023904751.1 Phenylpropanoid 4CL low borderline
XP_023905187.1 Phenylpropanoid 4CL medium pass
XP_023905289.1 Phenylpropanoid 4CL low borderline
XP_023906410.1 Phenylpropanoid 4CL medium pass
XP_023906962.1 Phenylpropanoid 4CL low borderline
XP_023906963.1 Phenylpropanoid 4CL low borderline
XP_023906973.1 Phenylpropanoid 4CL low borderline
XP_023907022.1 Phenylpropanoid 4CL medium pass
XP_023907090.1 Phenylpropanoid 4CL low borderline
XP_023907272.1 Phenylpropanoid 4CL medium pass
XP_023907762.1 Phenylpropanoid 4CL low borderline
XP_023907871.1 Phenylpropanoid 4CL low borderline
XP_023907979.1 Phenylpropanoid 4CL low borderline
XP_023908123.1 Phenylpropanoid 4CL low borderline
XP_023908644.1 Phenylpropanoid 4CL low borderline
XP_023908836.1 Phenylpropanoid 4CL low borderline
XP_023909594.1 Phenylpropanoid 4CL low borderline
XP_023909597.1 Phenylpropanoid 4CL low borderline
XP_023909598.1 Phenylpropanoid 4CL low borderline
XP_023909604.1 Phenylpropanoid 4CL low borderline
XP_023909605.1 Phenylpropanoid 4CL low borderline
XP_023909606.1 Phenylpropanoid 4CL low borderline
XP_023909607.1 Phenylpropanoid 4CL low borderline
XP_023909639.1 Phenylpropanoid 4CL low borderline
XP_023909640.1 Phenylpropanoid 4CL low borderline
XP_023909802.1 Phenylpropanoid 4CL medium pass
XP_023909870.1 Phenylpropanoid 4CL low borderline
XP_023909882.1 Phenylpropanoid 4CL low borderline
XP_023909898.1 Phenylpropanoid 4CL low borderline
XP_023909899.1 Phenylpropanoid 4CL low borderline
XP_023909902.1 Phenylpropanoid 4CL low borderline
XP_023909905.1 Phenylpropanoid 4CL low borderline
XP_023909906.1 Phenylpropanoid 4CL low borderline
XP_023909961.1 Phenylpropanoid 4CL low borderline
XP_023910540.1 Phenylpropanoid 4CL medium pass
XP_023910555.1 Phenylpropanoid 4CL medium pass
XP_023911500.1 Phenylpropanoid 4CL low borderline
XP_023911786.1 Phenylpropanoid 4CL medium pass
XP_023911787.1 Phenylpropanoid 4CL medium pass
XP_023912271.1 Phenylpropanoid 4CL low borderline