PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
XP_023877023.1 Rosmarinic Acid C4H low borderline
XP_023877024.1 Rosmarinic Acid C4H low borderline
XP_023877274.1 Rosmarinic Acid C4H low borderline
XP_023877469.1 Rosmarinic Acid C4H low borderline
XP_023877526.1 Rosmarinic Acid C4H low borderline
XP_023877980.1 Rosmarinic Acid C4H low borderline
XP_023877983.1 Rosmarinic Acid C4H low borderline
XP_023877984.1 Rosmarinic Acid C4H low borderline
XP_023878359.1 Rosmarinic Acid C4H low borderline
XP_023878409.1 Rosmarinic Acid C4H low borderline
XP_023879126.1 Rosmarinic Acid C4H medium pass
XP_023879127.1 Rosmarinic Acid C4H low borderline
XP_023879341.1 Rosmarinic Acid C4H low borderline
XP_023879609.1 Rosmarinic Acid C4H low borderline
XP_023879758.1 Rosmarinic Acid C4H low borderline
XP_023879894.1 Rosmarinic Acid C4H medium pass
XP_023879904.1 Rosmarinic Acid C4H medium pass
XP_023880627.1 Rosmarinic Acid C4H low borderline
XP_023880629.1 Rosmarinic Acid C4H low borderline
XP_023880630.1 Rosmarinic Acid C4H low borderline
XP_023880632.1 Rosmarinic Acid C4H low borderline
XP_023880639.1 Rosmarinic Acid C4H low borderline
XP_023880644.1 Rosmarinic Acid C4H low borderline
XP_023880700.1 Rosmarinic Acid C4H low borderline
XP_023880706.1 Rosmarinic Acid C4H low borderline
XP_023880736.1 Rosmarinic Acid C4H low borderline
XP_023880769.1 Rosmarinic Acid C4H low borderline
XP_023880836.1 Rosmarinic Acid C4H low borderline
XP_023880839.1 Rosmarinic Acid C4H low borderline
XP_023880843.1 Rosmarinic Acid C4H low borderline
XP_023881632.1 Rosmarinic Acid C4H low borderline
XP_023881983.1 Rosmarinic Acid C4H medium pass
XP_023882012.1 Rosmarinic Acid C4H low borderline
XP_023882271.1 Rosmarinic Acid C4H medium pass
XP_023882330.1 Rosmarinic Acid C4H low borderline
XP_023882582.1 Rosmarinic Acid C4H low borderline
XP_023882638.1 Rosmarinic Acid C4H low borderline
XP_023883324.1 Rosmarinic Acid C4H medium pass
XP_023883325.1 Rosmarinic Acid C4H medium pass
XP_023883849.1 Rosmarinic Acid C4H medium pass
XP_023883926.1 Rosmarinic Acid C4H medium pass
XP_023883927.1 Rosmarinic Acid C4H medium pass
XP_023883966.1 Rosmarinic Acid C4H medium pass
XP_023884189.1 Rosmarinic Acid C4H low borderline
XP_023884190.1 Rosmarinic Acid C4H low borderline
XP_023884318.1 Rosmarinic Acid C4H medium pass
XP_023884347.1 Rosmarinic Acid C4H medium pass
XP_023884378.1 Rosmarinic Acid C4H low borderline
XP_023884379.1 Rosmarinic Acid C4H low borderline
XP_023884594.1 Rosmarinic Acid C4H low borderline