PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
XP_023891821.1 Rosmarinic Acid C4H medium pass
XP_023892033.1 Rosmarinic Acid C4H medium pass
XP_023892038.1 Rosmarinic Acid C4H medium pass
XP_023892161.1 Rosmarinic Acid C4H low borderline
XP_023892164.1 Rosmarinic Acid C4H low borderline
XP_023892168.1 Rosmarinic Acid C4H medium pass
XP_023892174.1 Rosmarinic Acid C4H low borderline
XP_023892233.1 Rosmarinic Acid C4H low borderline
XP_023892234.1 Rosmarinic Acid C4H low borderline
XP_023892402.1 Rosmarinic Acid C4H medium pass
XP_023892403.1 Rosmarinic Acid C4H medium pass
XP_023892739.1 Rosmarinic Acid C4H medium pass
XP_023892758.1 Rosmarinic Acid C4H low borderline
XP_023892759.1 Rosmarinic Acid C4H low borderline
XP_023892851.1 Rosmarinic Acid C4H low borderline
XP_023892852.1 Rosmarinic Acid C4H low borderline
XP_023892867.1 Rosmarinic Acid C4H medium pass
XP_023892894.1 Rosmarinic Acid C4H medium pass
XP_023892898.1 Rosmarinic Acid C4H low borderline
XP_023893131.1 Rosmarinic Acid C4H medium pass
XP_023893283.1 Rosmarinic Acid C4H low borderline
XP_023893289.1 Rosmarinic Acid C4H low borderline
XP_023893292.1 Rosmarinic Acid C4H low borderline
XP_023893293.1 Rosmarinic Acid C4H low borderline
XP_023893294.1 Rosmarinic Acid C4H low borderline
XP_023893323.1 Rosmarinic Acid C4H low borderline
XP_023893474.1 Rosmarinic Acid C4H low borderline
XP_023893496.1 Rosmarinic Acid C4H low borderline
XP_023893592.1 Rosmarinic Acid C4H low borderline
XP_023893594.1 Rosmarinic Acid C4H low borderline
XP_023893624.1 Rosmarinic Acid C4H low borderline
XP_023893625.1 Rosmarinic Acid C4H low borderline
XP_023894247.1 Rosmarinic Acid C4H low borderline
XP_023894277.1 Rosmarinic Acid C4H low borderline
XP_023894807.1 Rosmarinic Acid C4H low borderline
XP_023894876.1 Rosmarinic Acid C4H low borderline
XP_023894878.1 Rosmarinic Acid C4H low borderline
XP_023894880.1 Rosmarinic Acid C4H low borderline
XP_023894899.1 Rosmarinic Acid C4H low borderline
XP_023894904.1 Rosmarinic Acid C4H low borderline
XP_023894906.1 Rosmarinic Acid C4H low borderline
XP_023894941.1 Rosmarinic Acid C4H low borderline
XP_023895142.1 Rosmarinic Acid C4H low borderline
XP_023895293.1 Rosmarinic Acid C4H low borderline
XP_023895344.1 Rosmarinic Acid C4H low borderline
XP_023895443.1 Rosmarinic Acid C4H low borderline
XP_023895599.1 Rosmarinic Acid C4H medium pass
XP_023895630.1 Rosmarinic Acid C4H medium pass
XP_023896019.1 Rosmarinic Acid C4H low borderline
XP_023896997.1 Rosmarinic Acid C4H low borderline