PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
XP_023904768.1 Alkaloid CODM/T6ODM medium borderline
XP_023904946.1 Alkaloid CODM/T6ODM medium borderline
XP_023904960.1 Alkaloid CODM/T6ODM medium borderline
XP_023905824.1 Alkaloid CODM/T6ODM medium borderline
XP_023909414.1 Alkaloid CODM/T6ODM medium borderline
XP_023909494.1 Alkaloid CODM/T6ODM medium borderline
XP_023911019.1 Alkaloid CODM/T6ODM medium borderline
XP_023913112.1 Alkaloid CODM/T6ODM medium borderline
XP_023913406.1 Alkaloid CODM/T6ODM medium borderline
XP_023913872.1 Alkaloid CODM/T6ODM medium borderline
XP_023915183.1 Alkaloid CODM/T6ODM medium borderline
XP_023916316.1 Alkaloid CODM/T6ODM medium borderline
XP_023916319.1 Alkaloid CODM/T6ODM medium borderline
XP_023917923.1 Alkaloid CODM/T6ODM medium borderline
XP_023918033.1 Alkaloid CODM/T6ODM medium borderline
XP_023918189.1 Alkaloid CODM/T6ODM medium borderline
XP_023918191.1 Alkaloid CODM/T6ODM medium borderline
XP_023918530.1 Alkaloid CODM/T6ODM medium borderline
XP_023918890.1 Alkaloid CODM/T6ODM medium borderline
XP_023919139.1 Alkaloid CODM/T6ODM medium borderline
XP_023919602.1 Alkaloid CODM/T6ODM medium borderline
XP_023919972.1 Alkaloid CODM/T6ODM medium borderline
XP_023920187.1 Alkaloid CODM/T6ODM medium borderline
XP_023920188.1 Alkaloid CODM/T6ODM medium borderline
XP_023920816.1 Alkaloid CODM/T6ODM medium borderline
XP_023920817.1 Alkaloid CODM/T6ODM medium borderline
XP_023920820.1 Alkaloid CODM/T6ODM medium borderline
XP_023921298.1 Alkaloid CODM/T6ODM medium borderline
XP_023922227.1 Alkaloid CODM/T6ODM medium borderline
XP_023922383.1 Alkaloid CODM/T6ODM medium borderline
XP_023924655.1 Alkaloid CODM/T6ODM medium borderline
XP_023925527.1 Alkaloid CODM/T6ODM low borderline
XP_023928032.1 Alkaloid CODM/T6ODM medium borderline
XP_023928033.1 Alkaloid CODM/T6ODM medium borderline
XP_023928500.1 Alkaloid CODM/T6ODM medium borderline
XP_023928897.1 Alkaloid CODM/T6ODM medium borderline
XP_023929436.1 Alkaloid CODM/T6ODM medium borderline
XP_023929545.1 Alkaloid CODM/T6ODM medium borderline
XP_023929546.1 Alkaloid CODM/T6ODM medium borderline