PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
XP_023907057.1 Phenylpropanoid COMT medium pass
XP_023907065.1 Phenylpropanoid COMT medium pass
XP_023907751.1 Phenylpropanoid COMT low borderline
XP_023908840.1 Phenylpropanoid COMT low borderline
XP_023910052.1 Phenylpropanoid COMT medium pass
XP_023910243.1 Phenylpropanoid COMT low borderline
XP_023910626.1 Phenylpropanoid COMT medium pass
XP_023911346.1 Phenylpropanoid COMT medium pass
XP_023913111.1 Phenylpropanoid COMT medium pass
XP_023913550.1 Phenylpropanoid COMT medium pass
XP_023918348.1 Phenylpropanoid COMT medium pass
XP_023918719.1 Phenylpropanoid COMT medium pass
XP_023919591.1 Phenylpropanoid COMT medium pass
XP_023919596.1 Phenylpropanoid COMT medium pass
XP_023919597.1 Phenylpropanoid COMT medium pass
XP_023919598.1 Phenylpropanoid COMT medium pass
XP_023922814.1 Phenylpropanoid COMT low borderline
XP_023922951.1 Phenylpropanoid COMT medium pass
XP_023922952.1 Phenylpropanoid COMT medium pass
XP_023924765.1 Phenylpropanoid COMT medium pass
XP_023925732.1 Phenylpropanoid COMT medium pass
XP_023927940.1 Phenylpropanoid COMT medium pass