PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Family-Level Assignments
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
XP_023890219.1 Flavonoid F3H medium borderline
XP_023890222.1 Flavonoid F3H medium borderline
XP_023890973.1 Flavonoid F3H medium borderline
XP_023890985.1 Flavonoid F3H medium borderline
XP_023891187.1 Flavonoid F3H medium borderline
XP_023891189.1 Flavonoid F3H low borderline
XP_023891190.1 Flavonoid F3H low borderline
XP_023891194.1 Flavonoid F3H medium borderline
XP_023891203.1 Flavonoid F3H medium borderline
XP_023891204.1 Flavonoid F3H medium borderline
XP_023891929.1 Flavonoid F3H medium borderline
XP_023892173.1 Flavonoid F3H medium borderline
XP_023892623.1 Flavonoid F3H low borderline
XP_023893566.1 Flavonoid F3H medium pass
XP_023893570.1 Flavonoid F3H medium pass
XP_023894176.1 Flavonoid F3H medium borderline
XP_023895466.1 Flavonoid F3H medium borderline
XP_023895776.1 Flavonoid F3H medium borderline
XP_023895849.1 Flavonoid F3H medium borderline
XP_023896589.1 Flavonoid F3H medium borderline
XP_023896818.1 Flavonoid F3H medium borderline
XP_023897324.1 Flavonoid F3H medium borderline
XP_023897345.1 Flavonoid F3H low borderline
XP_023897456.1 Flavonoid F3H low borderline
XP_023898107.1 Flavonoid F3H medium borderline
XP_023898865.1 Flavonoid F3H medium borderline
XP_023899680.1 Flavonoid F3H medium borderline
XP_023899876.1 Flavonoid F3H medium borderline
XP_023899878.1 Flavonoid F3H medium borderline
XP_023900061.1 Flavonoid F3H medium borderline
XP_023901118.1 Flavonoid F3H medium borderline
XP_023902136.1 Flavonoid F3H medium borderline
XP_023904495.1 Flavonoid F3H medium borderline
XP_023904502.1 Flavonoid F3H medium borderline
XP_023904508.1 Flavonoid F3H medium borderline
XP_023904517.1 Flavonoid F3H medium borderline
XP_023904530.1 Flavonoid F3H medium borderline
XP_023904767.1 Flavonoid F3H medium borderline
XP_023904768.1 Flavonoid F3H medium borderline
XP_023904922.1 Flavonoid F3H medium borderline
XP_023904946.1 Flavonoid F3H medium borderline
XP_023904960.1 Flavonoid F3H medium borderline
XP_023905129.1 Flavonoid F3H low borderline
XP_023905824.1 Flavonoid F3H medium borderline
XP_023906350.1 Flavonoid F3H medium borderline
XP_023906393.1 Flavonoid F3H medium borderline
XP_023906394.1 Flavonoid F3H medium borderline
XP_023906426.1 Flavonoid F3H low borderline
XP_023909404.1 Flavonoid F3H low borderline
XP_023909414.1 Flavonoid F3H medium borderline