PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
Reset
Gene Pathway Family Confidence Status
XP_023870438.1 Alkaloid GS high pass
XP_023870450.1 Alkaloid GS high pass
XP_023870843.1 Alkaloid GS low borderline
XP_023871148.1 Alkaloid GS low borderline
XP_023871228.1 Alkaloid GS low borderline
XP_023872093.1 Alkaloid GS high pass
XP_023872111.1 Alkaloid GS high pass
XP_023874277.1 Alkaloid GS medium pass
XP_023874278.1 Alkaloid GS medium pass
XP_023875132.1 Alkaloid GS low borderline
XP_023876236.1 Alkaloid GS low borderline
XP_023877178.1 Alkaloid GS low borderline
XP_023877348.1 Alkaloid GS low borderline
XP_023877446.1 Alkaloid GS medium pass
XP_023877560.1 Alkaloid GS medium pass
XP_023877609.1 Alkaloid GS medium pass
XP_023877611.1 Alkaloid GS medium pass
XP_023878679.1 Alkaloid GS low borderline
XP_023878700.1 Alkaloid GS low borderline
XP_023881082.1 Alkaloid GS low borderline
XP_023881174.1 Alkaloid GS medium pass
XP_023882500.1 Alkaloid GS low borderline
XP_023882903.1 Alkaloid GS low borderline
XP_023882904.1 Alkaloid GS low borderline
XP_023882969.1 Alkaloid GS medium pass
XP_023883167.1 Alkaloid GS medium pass
XP_023885937.1 Alkaloid GS low borderline
XP_023886071.1 Alkaloid GS low borderline
XP_023887306.1 Alkaloid GS high pass
XP_023887331.1 Alkaloid GS high pass
XP_023887404.1 Alkaloid GS high pass
XP_023887862.1 Alkaloid GS high pass
XP_023887880.1 Alkaloid GS medium pass
XP_023888074.1 Alkaloid GS medium pass
XP_023888621.1 Alkaloid GS medium pass
XP_023889201.1 Alkaloid GS low borderline
XP_023889352.1 Alkaloid GS low borderline
XP_023890346.1 Alkaloid GS low borderline
XP_023890381.1 Alkaloid GS medium pass
XP_023890601.1 Alkaloid GS low borderline
XP_023890660.1 Alkaloid GS low borderline
XP_023890712.1 Alkaloid GS medium pass
XP_023890730.1 Alkaloid GS low borderline
XP_023891031.1 Alkaloid GS low borderline
XP_023891904.1 Alkaloid GS high pass
XP_023892229.1 Alkaloid GS low borderline
XP_023892650.1 Alkaloid GS low borderline
XP_023892651.1 Alkaloid GS low borderline
XP_023893109.1 Alkaloid GS low borderline
XP_023893110.1 Alkaloid GS low borderline