PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
XP_023893116.1 Alkaloid GS low borderline
XP_023894285.1 Alkaloid GS high pass
XP_023894286.1 Alkaloid GS high pass
XP_023894296.1 Alkaloid GS high pass
XP_023894301.1 Alkaloid GS high pass
XP_023895222.1 Alkaloid GS low borderline
XP_023896039.1 Alkaloid GS low borderline
XP_023896226.1 Alkaloid GS medium pass
XP_023897000.1 Alkaloid GS low borderline
XP_023898037.1 Alkaloid GS medium pass
XP_023898570.1 Alkaloid GS medium pass
XP_023898601.1 Alkaloid GS medium pass
XP_023898810.1 Alkaloid GS low borderline
XP_023899241.1 Alkaloid GS medium pass
XP_023899244.1 Alkaloid GS medium pass
XP_023899436.1 Alkaloid GS medium pass
XP_023899555.1 Alkaloid GS low borderline
XP_023899603.1 Alkaloid GS medium pass
XP_023899726.1 Alkaloid GS low borderline
XP_023900358.1 Alkaloid GS medium pass
XP_023901027.1 Alkaloid GS medium pass
XP_023901634.1 Alkaloid GS low borderline
XP_023901720.1 Alkaloid GS low borderline
XP_023901804.1 Alkaloid GS medium pass
XP_023901831.1 Alkaloid GS low borderline
XP_023901871.1 Alkaloid GS medium pass
XP_023902494.1 Alkaloid GS medium pass
XP_023902922.1 Alkaloid GS medium pass
XP_023902965.1 Alkaloid GS medium pass
XP_023902966.1 Alkaloid GS medium pass
XP_023902967.1 Alkaloid GS medium pass
XP_023902998.1 Alkaloid GS medium pass
XP_023905272.1 Alkaloid GS low borderline
XP_023906984.1 Alkaloid GS low borderline
XP_023907000.1 Alkaloid GS medium pass
XP_023907762.1 Alkaloid GS low borderline
XP_023908616.1 Alkaloid GS low borderline
XP_023909019.1 Alkaloid GS low borderline
XP_023909043.1 Alkaloid GS low borderline
XP_023909547.1 Alkaloid GS high pass
XP_023909645.1 Alkaloid GS low borderline
XP_023911518.1 Alkaloid GS medium pass
XP_023912945.1 Alkaloid GS high pass
XP_023913170.1 Alkaloid GS low borderline
XP_023913171.1 Alkaloid GS low borderline
XP_023913172.1 Alkaloid GS low borderline
XP_023913173.1 Alkaloid GS low borderline
XP_023913184.1 Alkaloid GS low borderline
XP_023913185.1 Alkaloid GS low borderline
XP_023914808.1 Alkaloid GS low borderline