PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
Reset
Gene Pathway Family Confidence Status
XP_023915942.1 Alkaloid GS medium pass
XP_023916543.1 Alkaloid GS low borderline
XP_023917302.1 Alkaloid GS low borderline
XP_023917309.1 Alkaloid GS low borderline
XP_023917710.1 Alkaloid GS medium pass
XP_023918334.1 Alkaloid GS medium pass
XP_023918491.1 Alkaloid GS high pass
XP_023918666.1 Alkaloid GS high pass
XP_023918667.1 Alkaloid GS high pass
XP_023918668.1 Alkaloid GS high pass
XP_023918669.1 Alkaloid GS high pass
XP_023918670.1 Alkaloid GS high pass
XP_023918672.1 Alkaloid GS high pass
XP_023919838.1 Alkaloid GS medium pass
XP_023922395.1 Alkaloid GS low borderline
XP_023922443.1 Alkaloid GS low borderline
XP_023922487.1 Alkaloid GS low borderline
XP_023922548.1 Alkaloid GS low borderline
XP_023922613.1 Alkaloid GS low borderline
XP_023922678.1 Alkaloid GS low borderline
XP_023922738.1 Alkaloid GS low borderline
XP_023922815.1 Alkaloid GS high pass
XP_023922816.1 Alkaloid GS high pass
XP_023922838.1 Alkaloid GS low borderline
XP_023924531.1 Alkaloid GS high pass
XP_023924532.1 Alkaloid GS high pass
XP_023926221.1 Alkaloid GS low borderline
XP_023926919.1 Alkaloid GS medium pass
XP_023926920.1 Alkaloid GS medium pass
XP_023926977.1 Alkaloid GS medium pass
XP_023927026.1 Alkaloid GS low borderline
XP_023929029.1 Alkaloid GS low borderline
XP_023929152.1 Alkaloid GS medium pass
XP_023929588.1 Alkaloid GS low borderline
XP_023929605.1 Alkaloid GS medium pass