PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
XP_023871136.1 Alkaloid H6H medium pass
XP_023872301.1 Alkaloid H6H medium borderline
XP_023874729.1 Alkaloid H6H medium borderline
XP_023875907.1 Alkaloid H6H low borderline
XP_023876105.1 Alkaloid H6H low borderline
XP_023876328.1 Alkaloid H6H medium borderline
XP_023877503.1 Alkaloid H6H low borderline
XP_023878423.1 Alkaloid H6H low borderline
XP_023880193.1 Alkaloid H6H medium borderline
XP_023880508.1 Alkaloid H6H low borderline
XP_023880794.1 Alkaloid H6H low borderline
XP_023881353.1 Alkaloid H6H medium pass
XP_023881832.1 Alkaloid H6H low borderline
XP_023881833.1 Alkaloid H6H low borderline
XP_023881835.1 Alkaloid H6H low borderline
XP_023883489.1 Alkaloid H6H low borderline
XP_023883905.1 Alkaloid H6H medium borderline
XP_023885286.1 Alkaloid H6H high pass
XP_023887184.1 Alkaloid H6H medium borderline
XP_023887923.1 Alkaloid H6H low borderline
XP_023888482.1 Alkaloid H6H low borderline
XP_023888483.1 Alkaloid H6H low borderline
XP_023890973.1 Alkaloid H6H medium pass
XP_023890985.1 Alkaloid H6H medium borderline
XP_023891187.1 Alkaloid H6H high pass
XP_023891194.1 Alkaloid H6H high pass
XP_023891203.1 Alkaloid H6H high pass
XP_023891204.1 Alkaloid H6H high pass
XP_023891929.1 Alkaloid H6H medium borderline
XP_023892064.1 Alkaloid H6H low borderline
XP_023894627.1 Alkaloid H6H low borderline
XP_023894639.1 Alkaloid H6H low borderline
XP_023895466.1 Alkaloid H6H medium borderline
XP_023895849.1 Alkaloid H6H medium borderline
XP_023896818.1 Alkaloid H6H medium borderline
XP_023897345.1 Alkaloid H6H low borderline
XP_023898869.1 Alkaloid H6H low borderline
XP_023899680.1 Alkaloid H6H medium borderline
XP_023899845.1 Alkaloid H6H low borderline
XP_023899857.1 Alkaloid H6H low borderline
XP_023900061.1 Alkaloid H6H medium borderline
XP_023901118.1 Alkaloid H6H medium borderline
XP_023901265.1 Alkaloid H6H low borderline
XP_023903724.1 Alkaloid H6H low borderline
XP_023904922.1 Alkaloid H6H medium pass
XP_023905129.1 Alkaloid H6H low borderline
XP_023905343.1 Alkaloid H6H low borderline
XP_023906350.1 Alkaloid H6H medium borderline
XP_023906393.1 Alkaloid H6H medium borderline
XP_023906394.1 Alkaloid H6H medium borderline