PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
XP_023871030.1 Flavonoid IFR low borderline
XP_023871167.1 Flavonoid IFR low borderline
XP_023871830.1 Flavonoid IFR low borderline
XP_023871928.1 Flavonoid IFR low borderline
XP_023872459.1 Flavonoid IFR high pass
XP_023872528.1 Flavonoid IFR high pass
XP_023872529.1 Flavonoid IFR high pass
XP_023874693.1 Flavonoid IFR high pass
XP_023874962.1 Flavonoid IFR low borderline
XP_023874963.1 Flavonoid IFR low borderline
XP_023875129.1 Flavonoid IFR low borderline
XP_023875133.1 Flavonoid IFR low borderline
XP_023876625.1 Flavonoid IFR low borderline
XP_023876626.1 Flavonoid IFR low borderline
XP_023878387.1 Flavonoid IFR low borderline
XP_023878434.1 Flavonoid IFR high pass
XP_023878435.1 Flavonoid IFR high pass
XP_023878436.1 Flavonoid IFR high pass
XP_023878437.1 Flavonoid IFR high pass
XP_023878438.1 Flavonoid IFR high pass
XP_023878439.1 Flavonoid IFR high pass
XP_023878440.1 Flavonoid IFR high pass
XP_023882655.1 Flavonoid IFR low borderline
XP_023882927.1 Flavonoid IFR low borderline
XP_023883005.1 Flavonoid IFR low borderline
XP_023885723.1 Flavonoid IFR low borderline
XP_023886296.1 Flavonoid IFR low borderline
XP_023889258.1 Flavonoid IFR low borderline
XP_023889448.1 Flavonoid IFR low borderline
XP_023889453.1 Flavonoid IFR high pass
XP_023889454.1 Flavonoid IFR high pass
XP_023889455.1 Flavonoid IFR high pass
XP_023889880.1 Flavonoid IFR low borderline
XP_023890415.1 Flavonoid IFR low borderline
XP_023890445.1 Flavonoid IFR low borderline
XP_023891068.1 Flavonoid IFR low borderline
XP_023891334.1 Flavonoid IFR high pass
XP_023891335.1 Flavonoid IFR high pass
XP_023892327.1 Flavonoid IFR high pass
XP_023892328.1 Flavonoid IFR high pass
XP_023892330.1 Flavonoid IFR high pass
XP_023892333.1 Flavonoid IFR high pass
XP_023893770.1 Flavonoid IFR low borderline
XP_023894643.1 Flavonoid IFR low borderline
XP_023895987.1 Flavonoid IFR low borderline
XP_023896099.1 Flavonoid IFR low borderline
XP_023897414.1 Flavonoid IFR medium pass
XP_023898259.1 Flavonoid IFR low borderline
XP_023898735.1 Flavonoid IFR low borderline
XP_023900237.1 Flavonoid IFR low borderline