PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
XP_023900938.1 Flavonoid IFR low borderline
XP_023901331.1 Flavonoid IFR low borderline
XP_023901341.1 Flavonoid IFR low borderline
XP_023901634.1 Flavonoid IFR low borderline
XP_023901781.1 Flavonoid IFR medium pass
XP_023902870.1 Flavonoid IFR low borderline
XP_023903388.1 Flavonoid IFR high pass
XP_023904230.1 Flavonoid IFR high pass
XP_023904234.1 Flavonoid IFR high pass
XP_023904439.1 Flavonoid IFR low borderline
XP_023905566.1 Flavonoid IFR high pass
XP_023905812.1 Flavonoid IFR medium borderline
XP_023907015.1 Flavonoid IFR low borderline
XP_023907048.1 Flavonoid IFR low borderline
XP_023907051.1 Flavonoid IFR low borderline
XP_023907154.1 Flavonoid IFR low borderline
XP_023907362.1 Flavonoid IFR high pass
XP_023909016.1 Flavonoid IFR low borderline
XP_023909601.1 Flavonoid IFR low borderline
XP_023909613.1 Flavonoid IFR low borderline
XP_023910244.1 Flavonoid IFR low borderline
XP_023910627.1 Flavonoid IFR high pass
XP_023910633.1 Flavonoid IFR high pass
XP_023912312.1 Flavonoid IFR medium pass
XP_023912327.1 Flavonoid IFR high pass
XP_023912328.1 Flavonoid IFR high pass
XP_023912330.1 Flavonoid IFR high pass
XP_023912331.1 Flavonoid IFR high pass
XP_023913100.1 Flavonoid IFR high pass
XP_023913835.1 Flavonoid IFR high pass
XP_023913878.1 Flavonoid IFR low borderline
XP_023914485.1 Flavonoid IFR low borderline
XP_023914486.1 Flavonoid IFR low borderline
XP_023914671.1 Flavonoid IFR low borderline
XP_023916814.1 Flavonoid IFR low borderline
XP_023917309.1 Flavonoid IFR low borderline
XP_023917855.1 Flavonoid IFR low borderline
XP_023918868.1 Flavonoid IFR low borderline
XP_023920413.1 Flavonoid IFR low borderline
XP_023921101.1 Flavonoid IFR medium pass
XP_023922211.1 Flavonoid IFR low borderline
XP_023922944.1 Flavonoid IFR low borderline
XP_023923765.1 Flavonoid IFR low borderline
XP_023925115.1 Flavonoid IFR high pass
XP_023925537.1 Flavonoid IFR low borderline
XP_023925632.1 Flavonoid IFR low borderline
XP_023926525.1 Flavonoid IFR low borderline
XP_023927210.1 Flavonoid IFR high pass
XP_023927214.1 Flavonoid IFR high pass
XP_023927215.1 Flavonoid IFR high pass