PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
XP_023892234.1 Flavonoid IFS medium borderline
XP_023892259.1 Flavonoid IFS low borderline
XP_023892403.1 Flavonoid IFS medium borderline
XP_023892598.1 Flavonoid IFS low borderline
XP_023892738.1 Flavonoid IFS low borderline
XP_023892739.1 Flavonoid IFS medium borderline
XP_023892851.1 Flavonoid IFS medium borderline
XP_023892852.1 Flavonoid IFS medium borderline
XP_023892867.1 Flavonoid IFS medium borderline
XP_023892894.1 Flavonoid IFS medium borderline
XP_023892898.1 Flavonoid IFS medium borderline
XP_023893242.1 Flavonoid IFS low borderline
XP_023893283.1 Flavonoid IFS low borderline
XP_023893289.1 Flavonoid IFS medium borderline
XP_023893469.1 Flavonoid IFS low borderline
XP_023893474.1 Flavonoid IFS low borderline
XP_023893496.1 Flavonoid IFS low borderline
XP_023893592.1 Flavonoid IFS low borderline
XP_023893594.1 Flavonoid IFS low borderline
XP_023893625.1 Flavonoid IFS low borderline
XP_023894807.1 Flavonoid IFS low borderline
XP_023894876.1 Flavonoid IFS medium borderline
XP_023894880.1 Flavonoid IFS medium borderline
XP_023894904.1 Flavonoid IFS medium borderline
XP_023894906.1 Flavonoid IFS medium borderline
XP_023895048.1 Flavonoid IFS low borderline
XP_023895248.1 Flavonoid IFS low borderline
XP_023895259.1 Flavonoid IFS low borderline
XP_023895293.1 Flavonoid IFS low borderline
XP_023895455.1 Flavonoid IFS low borderline
XP_023895456.1 Flavonoid IFS low borderline
XP_023895599.1 Flavonoid IFS medium borderline
XP_023896019.1 Flavonoid IFS low borderline
XP_023896997.1 Flavonoid IFS low borderline
XP_023896998.1 Flavonoid IFS low borderline
XP_023897868.1 Flavonoid IFS medium borderline
XP_023897881.1 Flavonoid IFS low borderline
XP_023897885.1 Flavonoid IFS low borderline
XP_023897955.1 Flavonoid IFS low borderline
XP_023897956.1 Flavonoid IFS low borderline
XP_023898170.1 Flavonoid IFS medium borderline
XP_023899226.1 Flavonoid IFS low borderline
XP_023899249.1 Flavonoid IFS low borderline
XP_023899317.1 Flavonoid IFS medium borderline
XP_023899566.1 Flavonoid IFS low borderline
XP_023899569.1 Flavonoid IFS low borderline
XP_023899738.1 Flavonoid IFS medium borderline
XP_023899782.1 Flavonoid IFS medium borderline
XP_023899800.1 Flavonoid IFS medium borderline
XP_023899911.1 Flavonoid IFS low borderline