PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
XP_023900190.1 Flavonoid IFS medium borderline
XP_023900191.1 Flavonoid IFS medium borderline
XP_023900506.1 Flavonoid IFS low borderline
XP_023900559.1 Flavonoid IFS medium borderline
XP_023900588.1 Flavonoid IFS low borderline
XP_023900826.1 Flavonoid IFS low borderline
XP_023901498.1 Flavonoid IFS low borderline
XP_023901673.1 Flavonoid IFS low borderline
XP_023902749.1 Flavonoid IFS low borderline
XP_023902755.1 Flavonoid IFS low borderline
XP_023903024.1 Flavonoid IFS low borderline
XP_023903170.1 Flavonoid IFS medium borderline
XP_023903171.1 Flavonoid IFS medium borderline
XP_023904077.1 Flavonoid IFS medium borderline
XP_023904078.1 Flavonoid IFS medium borderline
XP_023904079.1 Flavonoid IFS medium borderline
XP_023904313.1 Flavonoid IFS low borderline
XP_023904437.1 Flavonoid IFS low borderline
XP_023904537.1 Flavonoid IFS low borderline
XP_023905069.1 Flavonoid IFS low borderline
XP_023905480.1 Flavonoid IFS medium borderline
XP_023905481.1 Flavonoid IFS medium borderline
XP_023905490.1 Flavonoid IFS medium borderline
XP_023905960.1 Flavonoid IFS medium borderline
XP_023906709.1 Flavonoid IFS medium borderline
XP_023906874.1 Flavonoid IFS low borderline
XP_023908470.1 Flavonoid IFS medium borderline
XP_023908530.1 Flavonoid IFS medium borderline
XP_023909133.1 Flavonoid IFS medium borderline
XP_023909384.1 Flavonoid IFS low borderline
XP_023909469.1 Flavonoid IFS medium borderline
XP_023909649.1 Flavonoid IFS medium borderline
XP_023909939.1 Flavonoid IFS low borderline
XP_023909958.1 Flavonoid IFS low borderline
XP_023910352.1 Flavonoid IFS low borderline
XP_023911947.1 Flavonoid IFS low borderline
XP_023911948.1 Flavonoid IFS low borderline
XP_023912321.1 Flavonoid IFS medium borderline
XP_023912343.1 Flavonoid IFS low borderline
XP_023912344.1 Flavonoid IFS low borderline
XP_023912345.1 Flavonoid IFS low borderline
XP_023912603.1 Flavonoid IFS medium borderline
XP_023912621.1 Flavonoid IFS low borderline
XP_023912913.1 Flavonoid IFS medium borderline
XP_023913568.1 Flavonoid IFS medium borderline
XP_023913657.1 Flavonoid IFS low borderline
XP_023913831.1 Flavonoid IFS medium borderline
XP_023913832.1 Flavonoid IFS medium borderline
XP_023914098.1 Flavonoid IFS medium borderline
XP_023914107.1 Flavonoid IFS medium borderline