PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
Reset
Gene Pathway Family Confidence Status
XP_023914325.1 Flavonoid IFS medium borderline
XP_023914327.1 Flavonoid IFS medium borderline
XP_023914328.1 Flavonoid IFS medium borderline
XP_023914331.1 Flavonoid IFS medium borderline
XP_023914333.1 Flavonoid IFS medium borderline
XP_023914334.1 Flavonoid IFS medium borderline
XP_023914716.1 Flavonoid IFS low borderline
XP_023914985.1 Flavonoid IFS medium borderline
XP_023915513.1 Flavonoid IFS medium borderline
XP_023915540.1 Flavonoid IFS low borderline
XP_023915592.1 Flavonoid IFS medium borderline
XP_023915595.1 Flavonoid IFS medium borderline
XP_023915630.1 Flavonoid IFS low borderline
XP_023915645.1 Flavonoid IFS low borderline
XP_023915841.1 Flavonoid IFS medium borderline
XP_023916472.1 Flavonoid IFS medium borderline
XP_023916714.1 Flavonoid IFS medium borderline
XP_023916732.1 Flavonoid IFS medium borderline
XP_023916977.1 Flavonoid IFS low borderline
XP_023917344.1 Flavonoid IFS low borderline
XP_023917437.1 Flavonoid IFS medium borderline
XP_023917639.1 Flavonoid IFS low borderline
XP_023919180.1 Flavonoid IFS low borderline
XP_023920300.1 Flavonoid IFS low borderline
XP_023920301.1 Flavonoid IFS low borderline
XP_023920406.1 Flavonoid IFS medium borderline
XP_023920543.1 Flavonoid IFS low borderline
XP_023921521.1 Flavonoid IFS low borderline
XP_023922077.1 Flavonoid IFS medium borderline
XP_023922138.1 Flavonoid IFS medium borderline
XP_023922140.1 Flavonoid IFS medium borderline
XP_023922673.1 Flavonoid IFS low borderline
XP_023922777.1 Flavonoid IFS medium borderline
XP_023922830.1 Flavonoid IFS low borderline
XP_023922839.1 Flavonoid IFS low borderline
XP_023922867.1 Flavonoid IFS medium borderline
XP_023922900.1 Flavonoid IFS medium borderline
XP_023922902.1 Flavonoid IFS medium borderline
XP_023922931.1 Flavonoid IFS medium borderline
XP_023922932.1 Flavonoid IFS medium borderline
XP_023922933.1 Flavonoid IFS medium borderline
XP_023922937.1 Flavonoid IFS medium borderline
XP_023922949.1 Flavonoid IFS medium borderline
XP_023923098.1 Flavonoid IFS low borderline
XP_023923246.1 Flavonoid IFS medium borderline
XP_023924450.1 Flavonoid IFS medium borderline
XP_023924459.1 Flavonoid IFS medium borderline
XP_023924652.1 Flavonoid IFS medium borderline
XP_023925268.1 Flavonoid IFS medium borderline
XP_023925599.1 Flavonoid IFS low borderline