Quercus suber (quercus_suber)
Imported from atlas release summary for Quercus suber.
3724
Candidate Protein Records
3176
Pathway-Level Records
7645
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
7645
Family-Level Calls
C4H
5.78%
4CL
5.77%
C3'H/CYP98A
5.74%
BAHD
4.91%
UGT
4.6%
UFGT
4.33%
7DLGT
4.3%
IFS
3.56%
Other Families
61.01%
More Families (97)
POD
271
3.54%
T3O
265
3.47%
CYP76
262
3.43%
DWF4/CYP90B1
194
2.54%
TRI/TRII
163
2.13%
F3H
152
1.99%
NMT
149
1.95%
CAD
147
1.92%
GS
135
1.77%
STR
130
1.7%
F3'H/CYP75B
129
1.69%
BR6OX2/CYP85A2
119
1.56%
CAS
116
1.52%
SMT1/SMT2/SMT3
115
1.5%
IFR
105
1.37%
SGD
101
1.32%
CYP71
97
1.27%
CODM/T6ODM
89
1.16%
LAC
81
1.06%
HCT
75
0.98%
H6H
74
0.97%
COMT
72
0.94%
FNS
61
0.8%
TPS
56
0.73%
TAT
54
0.71%
ANR
53
0.69%
GES
52
0.68%
BR6OX1/CYP85A1
52
0.68%
PMT
50
0.65%
T16H
46
0.6%
16OMT
46
0.6%
IO
45
0.59%
CSE
45
0.59%
CYP90D1
44
0.58%
NCS
43
0.56%
SLS
42
0.55%
CNMT
42
0.55%
RAS
42
0.55%
G8O/G8H
40
0.52%
PYKS
40
0.52%
F3'5'H/CYP75A
39
0.51%
7DLH
38
0.5%
LAMT
37
0.48%
8HGO
35
0.46%
CCR
34
0.44%
BBE
30
0.39%
COR
28
0.37%
CYP51G1
28
0.37%
CCoAOMT
25
0.33%
CYP719
23
0.3%
FPPS
23
0.3%
F5H/CYP84A
22
0.29%
MPO
21
0.27%
PAL
21
0.27%
HPPR
21
0.27%
AACT
21
0.27%
TYDC_DDC
20
0.26%
DFR
19
0.25%
CPD/CYP90A1
19
0.25%
ROT3/CYP90C1
19
0.25%
GGPPS
19
0.25%
CPR
18
0.24%
SQS/FDFT1
16
0.21%
ISY
15
0.2%
ANS/LDOX
13
0.17%
CYP80F1
11
0.14%
CHS
9
0.12%
SQE
9
0.12%
MCT/IspD
9
0.12%
DXS
9
0.12%
TDC
8
0.1%
MVD
8
0.1%
CYP80B1
7
0.09%
HYD1
7
0.09%
MVK
7
0.09%
6OMT_4OMT_SOMT
6
0.08%
DWF1
6
0.08%
SMO1/SMO2
6
0.08%
HDR/IspH
6
0.08%
PMK
6
0.08%
DET2
5
0.07%
IDI
5
0.07%
HMGR
5
0.07%
HMGS
5
0.07%
ODC
4
0.05%
CHI
4
0.05%
DXR
4
0.05%
XMT_MXMT_DXMT
3
0.04%
DWF7
3
0.04%
FLS
2
0.03%
FK
2
0.03%
DWF5
2
0.03%
CPI1
2
0.03%
CMK/IspE
2
0.03%
HDS/IspG
2
0.03%
ADC
1
0.01%
MDS/IspF
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 870 | 19 | UGT (335) | View species results |
| Alkaloid pathway | 784 | 23 | 7DLGT (174) | View species results |
| Phenylpropanoid pathway | 600 | 12 | POD (257) | View species results |
| Flavonoid pathway | 437 | 12 | UFGT (313) | View species results |
| Rosmarinic acid pathway | 258 | 7 | C4H (101) | View species results |
| Steroid pathway | 227 | 12 | CAS (112) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2694 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 492 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| XP_023908191.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023908192.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023908193.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023908194.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023908195.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023908196.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023908653.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023909834.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023910293.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023910560.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023910843.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023911380.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023912483.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023912704.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_023913667.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023914219.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023915802.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023917560.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023917731.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023917732.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023919574.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023920559.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023922624.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023923357.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_023926875.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023926876.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_023927149.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_023929279.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_023929299.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_023929505.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |