PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
XP_023883325.1 Alkaloid T3O medium borderline
XP_023883926.1 Alkaloid T3O medium borderline
XP_023883927.1 Alkaloid T3O medium borderline
XP_023883966.1 Alkaloid T3O medium borderline
XP_023884189.1 Alkaloid T3O low borderline
XP_023884190.1 Alkaloid T3O low borderline
XP_023884318.1 Alkaloid T3O medium borderline
XP_023884347.1 Alkaloid T3O medium borderline
XP_023884524.1 Alkaloid T3O medium pass
XP_023884529.1 Alkaloid T3O medium pass
XP_023884530.1 Alkaloid T3O medium pass
XP_023884531.1 Alkaloid T3O medium pass
XP_023884949.1 Alkaloid T3O medium borderline
XP_023885051.1 Alkaloid T3O medium borderline
XP_023886170.1 Alkaloid T3O medium pass
XP_023886323.1 Alkaloid T3O medium borderline
XP_023886328.1 Alkaloid T3O medium borderline
XP_023886331.1 Alkaloid T3O medium borderline
XP_023886343.1 Alkaloid T3O medium borderline
XP_023886352.1 Alkaloid T3O medium borderline
XP_023886786.1 Alkaloid T3O medium pass
XP_023887411.1 Alkaloid T3O medium pass
XP_023887418.1 Alkaloid T3O medium borderline
XP_023887770.1 Alkaloid T3O medium pass
XP_023888813.1 Alkaloid T3O medium pass
XP_023888814.1 Alkaloid T3O medium pass
XP_023888815.1 Alkaloid T3O medium pass
XP_023888896.1 Alkaloid T3O medium borderline
XP_023888915.1 Alkaloid T3O medium borderline
XP_023888962.1 Alkaloid T3O medium borderline
XP_023888963.1 Alkaloid T3O medium borderline
XP_023888964.1 Alkaloid T3O medium borderline
XP_023889107.1 Alkaloid T3O medium borderline
XP_023889494.1 Alkaloid T3O medium pass
XP_023889578.1 Alkaloid T3O medium borderline
XP_023889579.1 Alkaloid T3O medium borderline
XP_023889619.1 Alkaloid T3O medium borderline
XP_023891095.1 Alkaloid T3O medium borderline
XP_023891208.1 Alkaloid T3O medium pass
XP_023891289.1 Alkaloid T3O medium borderline
XP_023891590.1 Alkaloid T3O medium pass
XP_023891631.1 Alkaloid T3O medium borderline
XP_023891742.1 Alkaloid T3O medium pass
XP_023891743.1 Alkaloid T3O medium pass
XP_023891744.1 Alkaloid T3O medium pass
XP_023891821.1 Alkaloid T3O medium borderline
XP_023891958.1 Alkaloid T3O medium pass
XP_023892038.1 Alkaloid T3O medium borderline
XP_023892164.1 Alkaloid T3O medium borderline
XP_023892168.1 Alkaloid T3O medium borderline