PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
XP_023892233.1 Alkaloid T3O low borderline
XP_023892234.1 Alkaloid T3O medium borderline
XP_023892402.1 Alkaloid T3O medium borderline
XP_023892403.1 Alkaloid T3O medium borderline
XP_023892739.1 Alkaloid T3O medium borderline
XP_023892758.1 Alkaloid T3O medium pass
XP_023892759.1 Alkaloid T3O medium pass
XP_023892851.1 Alkaloid T3O medium borderline
XP_023892852.1 Alkaloid T3O medium borderline
XP_023892894.1 Alkaloid T3O medium borderline
XP_023893242.1 Alkaloid T3O low borderline
XP_023893289.1 Alkaloid T3O medium borderline
XP_023893292.1 Alkaloid T3O medium borderline
XP_023893293.1 Alkaloid T3O medium borderline
XP_023893294.1 Alkaloid T3O medium borderline
XP_023893469.1 Alkaloid T3O medium pass
XP_023893474.1 Alkaloid T3O medium pass
XP_023893496.1 Alkaloid T3O medium pass
XP_023893592.1 Alkaloid T3O low borderline
XP_023893594.1 Alkaloid T3O low borderline
XP_023893831.1 Alkaloid T3O low borderline
XP_023894807.1 Alkaloid T3O medium pass
XP_023894876.1 Alkaloid T3O medium borderline
XP_023894878.1 Alkaloid T3O medium borderline
XP_023894880.1 Alkaloid T3O medium borderline
XP_023894904.1 Alkaloid T3O medium borderline
XP_023894906.1 Alkaloid T3O medium borderline
XP_023895048.1 Alkaloid T3O low borderline
XP_023895293.1 Alkaloid T3O medium pass
XP_023895443.1 Alkaloid T3O medium borderline
XP_023895599.1 Alkaloid T3O medium borderline
XP_023895630.1 Alkaloid T3O medium borderline
XP_023895962.1 Alkaloid T3O low borderline
XP_023896019.1 Alkaloid T3O low borderline
XP_023897160.1 Alkaloid T3O medium borderline
XP_023897868.1 Alkaloid T3O medium borderline
XP_023897881.1 Alkaloid T3O low borderline
XP_023897890.1 Alkaloid T3O medium borderline
XP_023897955.1 Alkaloid T3O medium pass
XP_023897956.1 Alkaloid T3O medium pass
XP_023898240.1 Alkaloid T3O low borderline
XP_023898469.1 Alkaloid T3O medium borderline
XP_023899213.1 Alkaloid T3O medium pass
XP_023899226.1 Alkaloid T3O medium pass
XP_023899249.1 Alkaloid T3O medium pass
XP_023899569.1 Alkaloid T3O low borderline
XP_023899737.1 Alkaloid T3O medium borderline
XP_023899738.1 Alkaloid T3O medium borderline
XP_023899782.1 Alkaloid T3O medium borderline
XP_023899800.1 Alkaloid T3O medium borderline