PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
XP_023899882.1 Alkaloid T3O medium borderline
XP_023900190.1 Alkaloid T3O medium borderline
XP_023900500.1 Alkaloid T3O medium borderline
XP_023900559.1 Alkaloid T3O medium borderline
XP_023900826.1 Alkaloid T3O low borderline
XP_023902700.1 Alkaloid T3O low borderline
XP_023902943.1 Alkaloid T3O low borderline
XP_023903024.1 Alkaloid T3O medium pass
XP_023903984.1 Alkaloid T3O medium borderline
XP_023904077.1 Alkaloid T3O medium borderline
XP_023904078.1 Alkaloid T3O medium borderline
XP_023904079.1 Alkaloid T3O medium borderline
XP_023904434.1 Alkaloid T3O medium borderline
XP_023904537.1 Alkaloid T3O medium pass
XP_023904538.1 Alkaloid T3O low borderline
XP_023905069.1 Alkaloid T3O low borderline
XP_023905480.1 Alkaloid T3O medium borderline
XP_023905960.1 Alkaloid T3O medium borderline
XP_023906709.1 Alkaloid T3O medium borderline
XP_023906874.1 Alkaloid T3O medium pass
XP_023907810.1 Alkaloid T3O medium borderline
XP_023909280.1 Alkaloid T3O medium pass
XP_023909469.1 Alkaloid T3O medium borderline
XP_023909649.1 Alkaloid T3O medium borderline
XP_023910008.1 Alkaloid T3O medium pass
XP_023910141.1 Alkaloid T3O medium pass
XP_023910144.1 Alkaloid T3O medium pass
XP_023910520.1 Alkaloid T3O medium borderline
XP_023910676.1 Alkaloid T3O medium borderline
XP_023910755.1 Alkaloid T3O medium borderline
XP_023912321.1 Alkaloid T3O medium borderline
XP_023912333.1 Alkaloid T3O medium borderline
XP_023912343.1 Alkaloid T3O low borderline
XP_023912344.1 Alkaloid T3O low borderline
XP_023912345.1 Alkaloid T3O medium pass
XP_023912603.1 Alkaloid T3O medium borderline
XP_023912794.1 Alkaloid T3O medium pass
XP_023912913.1 Alkaloid T3O medium borderline
XP_023913657.1 Alkaloid T3O medium pass
XP_023913831.1 Alkaloid T3O medium borderline
XP_023913832.1 Alkaloid T3O medium borderline
XP_023914098.1 Alkaloid T3O medium borderline
XP_023914107.1 Alkaloid T3O medium borderline
XP_023914325.1 Alkaloid T3O medium borderline
XP_023914327.1 Alkaloid T3O medium borderline
XP_023914328.1 Alkaloid T3O medium borderline
XP_023914331.1 Alkaloid T3O medium borderline
XP_023914333.1 Alkaloid T3O medium borderline
XP_023914334.1 Alkaloid T3O medium borderline
XP_023914985.1 Alkaloid T3O medium borderline