PlantSME Plant secondary metabolism enzyme database

Quercus suber (quercus_suber)

Imported from atlas release summary for Quercus suber.

3176
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 870 19 UGT (335) View species results
Alkaloid pathway 784 23 7DLGT (174) View species results
Phenylpropanoid pathway 600 12 POD (257) View species results
Flavonoid pathway 437 12 UFGT (313) View species results
Rosmarinic acid pathway 258 7 C4H (101) View species results
Steroid pathway 227 12 CAS (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2694 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 492 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
XP_023891279.1 Alkaloid TRI/TRII medium pass
XP_023891284.1 Alkaloid TRI/TRII medium pass
XP_023891285.1 Alkaloid TRI/TRII medium pass
XP_023891286.1 Alkaloid TRI/TRII medium pass
XP_023891528.1 Alkaloid TRI/TRII medium pass
XP_023891532.1 Alkaloid TRI/TRII medium pass
XP_023891961.1 Alkaloid TRI/TRII medium pass
XP_023891962.1 Alkaloid TRI/TRII medium pass
XP_023892659.1 Alkaloid TRI/TRII medium pass
XP_023894013.1 Alkaloid TRI/TRII low borderline
XP_023894187.1 Alkaloid TRI/TRII medium pass
XP_023894188.1 Alkaloid TRI/TRII medium pass
XP_023894197.1 Alkaloid TRI/TRII medium pass
XP_023894198.1 Alkaloid TRI/TRII medium pass
XP_023894200.1 Alkaloid TRI/TRII medium pass
XP_023894201.1 Alkaloid TRI/TRII medium pass
XP_023895024.1 Alkaloid TRI/TRII medium pass
XP_023895029.1 Alkaloid TRI/TRII medium pass
XP_023895032.1 Alkaloid TRI/TRII medium pass
XP_023895589.1 Alkaloid TRI/TRII medium pass
XP_023895590.1 Alkaloid TRI/TRII medium pass
XP_023895592.1 Alkaloid TRI/TRII medium pass
XP_023895755.1 Alkaloid TRI/TRII medium pass
XP_023895995.1 Alkaloid TRI/TRII low borderline
XP_023896187.1 Alkaloid TRI/TRII low borderline
XP_023897137.1 Alkaloid TRI/TRII medium pass
XP_023897138.1 Alkaloid TRI/TRII medium pass
XP_023897532.1 Alkaloid TRI/TRII low borderline
XP_023897595.1 Alkaloid TRI/TRII low borderline
XP_023897659.1 Alkaloid TRI/TRII low borderline
XP_023898307.1 Alkaloid TRI/TRII low borderline
XP_023898483.1 Alkaloid TRI/TRII low borderline
XP_023898976.1 Alkaloid TRI/TRII medium pass
XP_023899356.1 Alkaloid TRI/TRII medium pass
XP_023899395.1 Alkaloid TRI/TRII low borderline
XP_023899552.1 Alkaloid TRI/TRII low borderline
XP_023901686.1 Alkaloid TRI/TRII low borderline
XP_023902137.1 Alkaloid TRI/TRII medium pass
XP_023902421.1 Alkaloid TRI/TRII low borderline
XP_023903121.1 Alkaloid TRI/TRII medium pass
XP_023903594.1 Alkaloid TRI/TRII low borderline
XP_023905502.1 Alkaloid TRI/TRII low borderline
XP_023906293.1 Alkaloid TRI/TRII low borderline
XP_023906761.1 Alkaloid TRI/TRII medium pass
XP_023906987.1 Alkaloid TRI/TRII medium pass
XP_023907508.1 Alkaloid TRI/TRII medium pass
XP_023907598.1 Alkaloid TRI/TRII medium pass
XP_023907616.1 Alkaloid TRI/TRII medium pass
XP_023907619.1 Alkaloid TRI/TRII medium pass
XP_023907632.1 Alkaloid TRI/TRII medium pass